Duffyella gerundensis: EM595_1062
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Entry
EM595_1062 CDS
T04258
Symbol
rlpA
Name
(GenBank) Rare lipoprotein A
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ege
Duffyella gerundensis
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ege01011
]
EM595_1062 (rlpA)
Enzymes [BR:
ege01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
EM595_1062 (rlpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
ege01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
EM595_1062 (rlpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
CUU23298
UniProt:
A0A0U5GKB0
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All DBs
Position
1:complement(1162504..1163595)
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AA seq
363 aa
AA seq
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MRKDWLWIGVASLLLAACSTNDQQAPISSQQPAAYNGPVVEIGGVEPRYEPVNPATSQDY
SVNGKNYRIVKDPSNYSETGLASWYGEEANGTRTASGENFDPEALTAAHPTLPIPSYVRV
TNIANGRQIVVRINDRGPYKPGRIIDLSRAAGDRLNISNNSKVRIDFINVAPDGTLSGPG
TIGTRVAKQSYALPARPDIAGGGMTVLGTPSAPAPEMNQGESHPVDNSTLNSESDVGAPV
RSSGFLGAPQPLPGGVLESNEPAPAAPAMTQPAPPAAASATTAHPAVGYVVQVGAVKDPA
RAQQLMNNLSQRFSVPGAVEAAGDVQRVQLGGFKTRAEAAALQQRLKSEAQIDGFITSAR
PEM
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaggactggctttggattggcgtggcttcactgttgctggccgcctgtagcacc
aacgatcaacaggcaccgatttcatcgcaacagcctgccgcttacaacggaccggtggtg
gaaatcggcggcgttgagccgcgttatgaacctgtgaatccggccaccagccaggattac
agcgtcaacggcaaaaactaccgtatcgttaaggatccgtcgaactacagcgaaacgggc
cttgccagctggtacggcgaggaagccaacggtacgcgcaccgcctcgggcgagaacttt
gatcccgaagcccttaccgcagcgcatcccacgctacccatccccagctacgttcgcgtg
accaacatcgccaacggccgacagattgtagtgcgtatcaacgaccgtggcccttataag
ccaggccgcattattgacctgtcgcgtgcggcgggcgatcgcctgaacatctctaataac
agcaaggtgcgcattgattttattaatgtggcgccagacggcacgctttccggtcccggt
accatcggcactcgcgtcgctaaacagagctatgccctgcccgcacgtccggatatcgct
ggcggcggcatgacggtgctcggtacgccatcggcaccggcgccagagatgaaccagggt
gagagccatccggttgacaacagcacgctaaacagcgaaagcgatgtgggcgcaccggtg
cgcagcagcggtttccttggtgcaccacagccgctgccaggcggcgtgctggaaagcaac
gagcctgcgcctgctgctccggccatgactcagcccgctccccctgccgctgccagtgcc
acaacggcgcatccggcagttggttatgttgtgcaggtcggcgcggtgaaagatcccgct
cgtgcgcagcagctgatgaataatctgagccagcgcttcagcgtcccgggtgcggttgaa
gctgcaggtgatgtgcagcgcgtgcagcttggcggctttaaaacccgtgcggaagcagcc
gccctgcagcagcgcctgaaaagtgaagcgcagatcgatggctttattaccagcgctcgc
cctgaaatgtaa
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