Duffyella gerundensis: EM595_1100
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Entry
EM595_1100 CDS
T04258
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ege
Duffyella gerundensis
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ege03400
]
EM595_1100 (phrB)
Enzymes [BR:
ege01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
EM595_1100 (phrB)
DNA repair and recombination proteins [BR:
ege03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
EM595_1100 (phrB)
Prokaryotic type
EM595_1100 (phrB)
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
CUU23336
UniProt:
A0A0U5L1S8
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All DBs
Position
1:1202340..1203767
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AA seq
475 aa
AA seq
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MATHLVWLRNDLRINDNYALHAACRDNKATVIALYVATPGQWQDHDMAPKQAAFIAKSLH
LLQQSLAERGIALHYQQCDRYDDAVETVKTFCQQQKVDAFFYNYQYAINERERDAAVERA
LNALNITCQGFDDGLLLPPGSVQSGSNGMYKVFTPFSKAFVRRLHQELPECVPAPAARDG
APLTTLHRLTPFDYPQEAFDETLFPPGEQGGLARLREFCQQPVVQYQDRRNFPVLDGTSR
LSVHLATGTLSPRQCLHRLLKHHPDALDDGKSFIWLNELIWREFYTHLMVAWPMLCKHQP
FIGWTRKVQWQENNALLTAWQQGQTGYPIVDAAMRQMNALGWMHNRLRMITASFLVKDLL
IDWRTGERYFMRQLIDGDYAANNGGWQWAASTGTDSAPYFRIFNPTTQGERFDKDGEFIR
RWLPELKDVPDSDIHSPQQWAEKNHKKLDYPQPIVEHKDARKKTLDAFEAARNAS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcatctggtttggctgcgtaatgatttacgcatcaatgataactatgcgctg
catgccgcctgccgcgacaacaaggctaccgttattgccctttatgttgccacgcccggg
cagtggcaggaccacgatatggcgcccaaacaggccgcctttattgcaaaaagcctgcat
ctgctgcagcagtcgctggccgagcgcggcattgcgttgcactaccaacaatgcgatcgc
tatgacgatgcggtggaaacggtaaaaacgttttgccagcagcaaaaagtcgatgcgttt
ttttataattatcagtatgcaattaatgaacgcgagcgcgatgccgccgtggaacgtgcg
ctcaatgcgctaaacattacctgccagggatttgatgacggcctgctgcttccaccgggc
agcgtgcagagcggcagcaacggcatgtataaagttttcacgcccttcagtaaggcattt
gtgcgtcgcctgcatcaggaattgcccgagtgcgttccggcaccggccgcacgcgacggg
gcgccactgactacgctgcaccgccttacgccgtttgattatcctcaggaagcgtttgat
gaaacgctgtttccgccgggtgagcagggcggcctggcgcgactgcgtgaattttgccag
cagccggtggtgcagtatcaggatcgacgtaattttccggtactggacggcaccagccgt
ttatcggtgcatctcgctaccggtacgctttcgccgcgccagtgtcttcatcggttgtta
aaacaccatccagatgcgctcgacgacggcaaaagcttcatctggctcaacgagttgatc
tggcgagagttttatactcacctgatggtcgcctggccaatgctgtgtaagcaccagccc
ttcattggctggaccagaaaagtgcagtggcaggaaaacaatgctttgctcaccgcatgg
cagcaggggcagacgggctatcccatcgtggatgccgccatgcggcagatgaatgcgctg
ggctggatgcataaccggttgcgtatgatcaccgcaagctttttggtcaaagatctgctg
attgactggcgaacaggtgaacggtacttcatgcgtcagttgattgatggtgactatgcc
gcaaacaacggcggctggcagtgggcagcgtctaccggcaccgattccgcgccctatttt
cgcattttcaatcccaccacgcagggcgaacgttttgataaagacggcgagtttatccgc
cgctggctgccggaactaaaggatgtgccggatagcgacattcactctccgcagcagtgg
gcagagaaaaaccataagaaactcgattatccgcaaccgatcgtggaacataaggacgca
cgtaaaaaaacgttggacgcctttgaagcggcacgcaatgcctcataa
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