Duffyella gerundensis: EM595_1224
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Entry
EM595_1224 CDS
T04258
Symbol
stpA
Name
(GenBank) DNA-binding stpA-like protein (H-NS stpA)
KO
K03746
DNA-binding protein H-NS
Organism
ege
Duffyella gerundensis
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ege03036
]
EM595_1224 (stpA)
03400 DNA repair and recombination proteins [BR:
ege03400
]
EM595_1224 (stpA)
Chromosome and associated proteins [BR:
ege03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
EM595_1224 (stpA)
DNA repair and recombination proteins [BR:
ege03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EM595_1224 (stpA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
FapA_N
Motif
Other DBs
NCBI-ProteinID:
CUU23458
UniProt:
A0A0U5GKQ8
LinkDB
All DBs
Position
1:1332637..1333035
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AA seq
132 aa
AA seq
DB search
MSETLKVLNNIRTLRAQSRELSLTDLEEILEKFSVVVAERKEEVETEAAQTREKEEKLSK
YREMLIADGIDPGELLGAMEGGKKRAKRAPRPAKYKYTDENGEEKSWTGQGRTPAAIKKL
LDQGKKLEDFLI
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagacactcaaagtattaaacaatatacgtacgcttcgtgctcagtcacgtgag
ctgtcactgacagatttagaagaaattctggaaaagttctctgttgttgttgccgagcgt
aaagaagaagtagaaaccgaagctgcacagacgcgtgagaaagaggaaaaactttctaaa
tatcgtgaaatgctgatcgcagacggtatcgatccaggcgaattattgggcgcaatggaa
ggcggcaaaaaaagagcaaaacgtgctcctcgcccggctaaatataaatataccgatgag
aacggcgaagaaaaatcatggaccggccagggccgtacgccagccgcgatcaaaaaactg
ctcgatcagggtaaaaaactcgaagactttttaatctga
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