Duffyella gerundensis: EM595_1235
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Entry
EM595_1235 CDS
T04258
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ege
Duffyella gerundensis
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ege03009
]
EM595_1235 (rimO)
Enzymes [BR:
ege01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
EM595_1235 (rimO)
Ribosome biogenesis [BR:
ege03009
]
Prokaryotic type
ribosomal protein modification factors
EM595_1235 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
CUU23469
UniProt:
A0A0U5E8D5
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All DBs
Position
1:complement(1344824..1346152)
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AA seq
442 aa
AA seq
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MSQTTTMPPRVGFVSLGCPKNLVDSERILTELRTEGYEVVPRYDDAEIVIVNTCGFIDSA
VQESLEAIGEALNENGKVIVTGCLGAKENQIREVHPKVLEITGPHSYEQVLSHVHRYVPK
PQHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLDSRPIGSVLDEAK
RLVEAGVKELLVISQDTSAYGVDVKHRTGFWNGSPVKTSMVSLCEQLAKLGVWVRLHYVY
PYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGAVERTLERIKRWREICPQLT
LRSTFIVGFPGETEEEFQMLLDFLKEARLDRVGCFKYSPVEGATANQLPDQVPEAVKEER
YDRFMQLQQKISSERLQEKVGREILVLIDEVDEEGAIGRSMADAPEIDGAVYLNGERDVK
PGDVIRAVVDHADEYDLWATKR
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaacaacaacaatgccgccgcgtgtaggtttcgtctcactcggctgtccaaaa
aacctggtagattcagagcgtatcctcaccgagctgcgcactgaaggctacgaagtcgtg
ccccgttatgacgacgctgagatcgtgatcgtgaatacctgcggcttcattgacagcgcg
gttcaggaatccctggaagcgattggcgaagcgctgaatgaaaacggcaaggtgattgtc
accggctgcctcggcgcgaaagagaaccaaattcgtgaagtgcacccaaaggtgctggag
attaccggtccgcacagctatgagcaggtgctgtcgcacgtgcatcgttatgtgccaaag
ccacagcacaacccgtttctaagcctggtgccggaacagggcgtcaagctgacgccgcgt
cattacgcctatctgaagatctccgaaggctgtaatcatcgctgcaccttctgcatcatt
ccttccatgcgtggcgatctcgacagccgtccgattggttcggtgctggatgaggcaaaa
cgtctggtagaagcgggcgtcaaagagctgctggtgatctcccaggacacctcagcctac
ggcgttgatgtgaaacatcgcaccggtttctggaacggctcgccggtgaaaaccagcatg
gtcagcctgtgcgaacaactggcgaagcttggcgtttgggtacgtctgcattacgtctac
ccttatccgcatgtggatgatgtcattccactgatggcggaaggcaagatcctgccgtat
ctcgatattcctttacagcatgccagcccgcgtattctgaagctgatgaaacgtcctggc
gcggtagaacgcacgctggagcgcatcaaacgctggcgtgaaatctgcccgcagctgacg
ctgcgctcaacctttatcgtcggttttcctggcgaaacggaagaggagttccagatgctg
ctcgacttcctgaaagaggcgcgtctcgatcgcgtgggctgcttcaaatacagcccggtg
gaaggcgcaaccgccaaccagctgcccgatcaggtgccggaagcggtgaaagaagaacgc
tacgatcgctttatgcagctacagcagaaaatctccagcgagcggctgcaggagaaagtg
ggccgtgaaattctggtgctgattgacgaagtcgatgaagaaggcgctatcggccgcagt
atggccgatgcacctgaaattgacggcgcggtttaccttaacggtgaacgtgacgtgaag
ccgggcgatgtgatccgcgcggtggtcgatcacgccgatgaatacgatttgtgggcaact
aagcgctaa
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