Duffyella gerundensis: EM595_1485
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Entry
EM595_1485 CDS
T04258
Symbol
ymfC
Name
(GenBank) putative ribosomal large subunit pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
ege
Duffyella gerundensis
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ege03009
]
EM595_1485 (ymfC)
Enzymes [BR:
ege01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
EM595_1485 (ymfC)
Ribosome biogenesis [BR:
ege03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EM595_1485 (ymfC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
CUU23719
UniProt:
A0A0U5L5G8
LinkDB
All DBs
Position
1:complement(1604286..1604942)
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AA seq
218 aa
AA seq
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MRPFSQTAKPMRQTPVKHHRLKRFSDKRAPARRVTGPQRIILFNKPYDVLPQFTNEAGRK
TLKDYIPIADVYAAGRLDRDSEGLLVLTNDGALQAALTQPGKRTHKTYFVQVEGVPEEHQ
LQRLRDGINLKDGPTLPAGAEAVAEPAWLWPRNPPIRERQSIPTQWLKITLHEGRNRQVR
RMTAHIGFPTLRLIRYAVGDMSLEDLAPGEWRDYHPTA
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccattctcacagactgcaaagcccatgcgacaaactcctgttaaacatcatcgc
cttaaacgattcagcgacaagcgcgccccggcccgtcgggtcacgggtccacaacgcatc
attctttttaacaaaccctatgacgtgctgccgcaatttaccaacgaagcgggacgcaaa
acgctgaaggattatattccgatcgccgacgtctatgccgctggtcggctcgaccgcgac
agtgaaggcctgctggtgctgaccaatgacggcgcgctgcaggcggcccttacccagcct
ggtaagcgcacgcataaaacctattttgttcaggtcgaaggcgtgcccgaagagcatcag
ctgcaacgcctgcgtgatggcattaatctgaaagatggcccaaccttaccggcaggtgcc
gaagcggtggcggaacccgcctggctctggccgcgtaatccgccgattcgtgagcggcaa
tcgatcccgacgcaatggctgaaaatcaccctgcacgaaggccgcaaccgtcaggttcgg
cgcatgacggcgcacattggctttccgacgctgcgtctgattcgctatgcggttggcgac
atgtcgctggaggatttggcacccggcgaatggcgcgactatcaccccacggcgtaa
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