Duffyella gerundensis: EM595_1610
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Entry
EM595_1610 CDS
T04258
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctulonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
ege
Duffyella gerundensis
Pathway
ege00541
Biosynthesis of various nucleotide sugars
ege01100
Metabolic pathways
ege01250
Biosynthesis of nucleotide sugars
Module
ege_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
EM595_1610 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ege01005
]
EM595_1610 (kdsA)
Enzymes [BR:
ege01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
EM595_1610 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
ege01005
]
Lipid A
EM595_1610 (kdsA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
CUU23844
UniProt:
A0A0U5GL34
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All DBs
Position
1:1728513..1729367
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AA seq
284 aa
AA seq
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MTQKVVNIGDIKVANDLPFVLFGGMNVLESQDLAMRICEHYVKVTEKLGIPYVFKASFDK
ANRSSIHSYRGPGLEEGMKIFQALKQAFGVKIITDVHEASQAQPVSEVVDVIQLPAFLAR
QTDLVEAMAKTGAVINIKKPQFVSPGQMGNIVEKFAEGGNENVILCDRGANFGYDNLVVD
MLGFNVMKKVSKNSPVIFDVTHALQTRDPFGAASGGRRAQVAELARAGMAVGIAGLFIEA
HPEPNSAMCDGPSALPLDKLEPFLAQMKAIDDLVKGFPELDTSK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgacacagaaagtagtcaatattggcgatatcaaagtagcaaacgacctgccgttcgtg
ctgtttggcgggatgaacgtgctggaatctcaggatctggctatgcgtatctgtgagcat
tacgtgaaggtcaccgagaaactcggcattccttacgtattcaaggcgtcgttcgataaa
gctaaccgctcatccatccactcctaccgcggtccgggtctggaagagggcatgaagatt
ttccaggcgctgaagcaggcgtttggcgtcaaaatcattaccgatgtgcatgaagcctca
caggcgcagccggtttctgaagtggtcgatgtgattcagctgccagcgttccttgcccgg
cagaccgatctggtggaagcgatggcgaaaactggcgcagtgatcaacatcaagaaacca
cagttcgttagcccgggtcagatgggcaatatcgttgagaagtttgccgaaggcggcaac
gaaaacgtgattctgtgcgatcgcggcgctaactttggctatgacaacctggttgtcgat
atgctcggctttaacgtcatgaagaaagtcagcaagaacagcccggttatttttgacgtg
acgcatgcgctgcaaacccgcgatccgttcggtgccgcctctggcggacgtcgcgcacag
gttgccgagctggcgcgtgccggtatggcggtgggtatcgccggtctgtttatcgaagcg
catcctgagccgaacagcgcaatgtgcgacggcccgtcggcgctgccgctggacaagctg
gagccgttcctcgcgcagatgaaagcaattgacgatctggtcaaaggcttccctgagctg
gacaccagcaagtaa
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