Duffyella gerundensis: EM595_1679
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Entry
EM595_1679 CDS
T04258
Symbol
ydiJ
Name
(GenBank) putative protein YdiJ
KO
K26063
(R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
Organism
ege
Duffyella gerundensis
Pathway
ege00310
Lysine degradation
ege01100
Metabolic pathways
ege01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
EM595_1679 (ydiJ)
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Gene cluster
GFIT
Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Fer4_8
Fer4_17
Fer4_20
BBE
Fer4_10
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
CUU23913
UniProt:
A0A0U5KZT2
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All DBs
Position
1:1804209..1807262
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AA seq
1017 aa
AA seq
DB search
MIPQISQAPGLVQLVLTFLNTLEQQGFTGDTATSYADRLTVSTDNSIYQQLPDAVIFPRS
TADVALIARVAGETRFESLVFTPRGGGTGTNGQSLNQGIVVDMSRYMNRILEINPEQGWV
RVEAGVIKDQLNAWLKPYGFFFSPELSTSNRATLGGMINTDASGQGSLVYGKTSDHVLAL
RAVLLGGEILDTRAMPVALAEQLAQEQTPEGRIYATVLERCREQRALIVEKFPALNRFLT
GYDLRHVLSDDLQTFDLTRILCGAEGTLAFISEARLDITPIPKARQLVNIKYNSFDAALR
NAPLLVEAQALSVETVDSKVLNLAREDIVWHSVRELIADVPDQEMLGLNIVEFAGNDVAL
IDSQVNALCARLDALMAQQEAGVIGYQLCEDLAGIERIYAMRKKAVGLLGNAKGRAKPIP
FVEDTAVPPQHLADYISDFRALLDSHGLSYGMFGHVDAGVLHVRPALDMCDPQQEMLMKQ
ISDEVVALTARYGGLLWGEHGKGYRAQYSPAFFGDTLYNELRRIKAAFDPLNRLNPGKIC
TPIGVDDPMMPVDGVKRGTFDRQIPVAVRSDWRGAMECNGNGLCFNFDVRSPMCPSMKIT
ANRIHSPKGRATLTREWLRLLVEKGVDPLELEQHLPTRSVSLRALISRTRNSWYASKGEY
DFSHEVKEAMSGCLACKACSTQCPIKIDVPGFRSRFLQLYHTRYLRPVSDHLVAGVETYA
PLMAKAPKAFNFFLRQPWLRELSRQHIGMVDLPLLSSPSLKQQLSGHPACAMTLEQLEAE
SAEKRANRVLIVQDPFTSYYEAQLVNDFVRLVEKLGYQPVLLPFSPNGKAQHVKGFLQRF
ARTAEKTADFLRRVARLGAPMVGVDPATVLCYRDEYQQTLGDKRGEFSVLMVQEWLSEVL
APRAVQPQTGESWYLFAHCTEVTALPASPNQWQGIFARFGATLENVSVGCCGMAGTYGHE
TKNLENSLGIYALSWHPQMQRLPRQRCLATGYSCRSQVKRIEGNGVRHPLQALLEMV
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgatcccacagatttcccaggcgccagggttggtacagctggtactgactttcctcaac
acccttgagcagcaaggctttactggtgataccgccaccagctatgccgatcgccttacc
gtctccacggacaacagcatttatcagcagctgcccgatgcggtgatttttccccgatct
accgccgatgtggcgctgattgcacgcgtggcgggtgaaacgcgctttgagagcctggtg
tttacaccgcgtggcggcggcaccggtactaacggtcagtcgctgaatcagggcatcgtg
gtcgacatgtcgcgctacatgaatcgcattctggaaatcaatcctgaacagggctgggta
cgcgttgaggcaggcgtgataaaagatcagctcaatgcctggctgaagccgtatggcttc
tttttctcaccggagctttccaccagcaaccgcgctacgctgggcggcatgatcaatacc
gatgcctctggccagggatcgctggtgtatggcaaaacgtccgatcatgtgctggccctg
cgtgccgtgctgttgggtggggaaatccttgatacgcgagccatgccggtggcgctggcc
gaacaactggcgcaggagcagacgccggaagggcgcatctatgccacggtgctggaacgc
tgccgcgagcagcgcgcgctgattgtggagaagtttccggcattaaatcgctttctgacc
ggctacgacctgcgccacgtgctcagcgacgatctgcaaaccttcgatctgacccgcatc
ctgtgtggcgcagaaggcacgctggcctttatcagcgaagcacggctggatatcacgccg
atcccaaaagcgcgtcagctggtgaatatcaaatacaactcttttgatgccgcattgcgt
aacgcgccgttgctggtcgaggcgcaggcgttgtcggtagagaccgtggattcaaaagtg
ctcaatctggcgcgggaagatatcgtctggcattcggtgcgtgagctgattgcagatgtg
ccggatcaagagatgctcggcctgaatatcgttgagtttgccggtaacgacgtggcgctg
atcgacagccaggttaacgcgctctgtgcccggcttgatgcgctgatggcgcaacaggaa
gcgggcgtcatcggttatcagctctgcgaggacttagcggggattgagcgtatctatgcg
atgcgcaagaaagcggttggtctgttgggcaatgccaaagggcgcgccaaacccattccg
tttgtggaagataccgccgtgccgccgcagcatctcgccgactatatcagcgactttcgt
gcgctgctggacagccatggcctgagttatggcatgtttggtcacgttgatgccggcgtg
ctgcatgtgcgacccgcgttagacatgtgcgatccgcaacaggagatgctgatgaagcag
atctccgatgaagtggtggcactgaccgcgcgctatggcggattactgtggggcgagcac
ggtaagggataccgcgcgcaatacagtcccgccttttttggcgacacgctgtacaacgag
ctgcgccgcatcaaagctgcctttgatccgctgaaccggctgaatccaggtaaaatctgt
acgccaatcggcgttgacgatccgatgatgccggttgatggcgtcaagcgcggcaccttt
gatcgccagattccggtggcggtacgcagtgactggcgcggcgccatggagtgcaacggt
aacgggctgtgctttaatttcgacgtacgcagtccgatgtgtccctcaatgaaaatcacc
gcgaaccgcattcactcgccaaaaggccgggcgaccttgacccgtgaatggttgcgattg
ctggtggaaaagggtgtcgatccgctggagctggagcagcatctgccgacgcgttcggtg
agcctgcgcgccttgatcagccgcacgcgcaatagttggtacgccagcaaaggggaatac
gacttttcgcacgaggtaaaggaggcgatgtcgggctgtctggcctgcaaagcctgctct
acccagtgcccgattaagatcgacgtgcctggcttccgatcgcgcttcctgcagctctac
catacgcgctacctgcgcccggtaagcgatcatctggttgcgggagtggaaacgtacgcg
ccgctgatggccaaagcgccgaaagcgttcaatttctttctgcggcagccgtggttgcgt
gaactgagccgccagcatattggcatggtggatctgccgctgctttcgtcgccttcactg
aagcagcagctctccggccatcccgcctgcgcaatgacgctggagcaactggaagccgaa
agcgcagagaaaagagccaatcgtgtgttgatcgtgcaggatcctttcaccagctattat
gaagcgcaactggttaatgactttgttcgcctggtcgaaaagctgggttaccagccggtg
ctgctgccattttcaccaaacggcaaggctcagcacgtgaaaggatttttacaacgcttt
gcccgcaccgccgaaaaaaccgccgatttcctgcgccgtgtggcacggctgggtgcgccg
atggtgggcgtcgatccggcgacggtactctgttatcgcgatgagtatcagcagacgctg
ggcgacaagcgcggcgagttctcggtcttgatggtgcaggagtggctgagtgaggtactt
gcgccgcgggcagttcagccgcagaccggtgaatcctggtatctgtttgcgcattgtacc
gaagtcactgccttgccggcgtcaccaaatcagtggcagggcatttttgctcgctttggc
gccacgctggaaaacgttagcgtcggctgttgcggcatggcgggaacctatgggcacgag
accaaaaaccttgaaaattcgctgggtatttatgcgctgtcgtggcatccgcagatgcag
cggttgccgcgtcagcgttgcctggctaccggctattcctgccgcagccaggtgaaaaga
attgagggtaatggcgtgagacatccgttacaggcgctgctggaaatggtataa
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