Duffyella gerundensis: EM595_1956
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Entry
EM595_1956 CDS
T04258
Symbol
yciL
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
ege
Duffyella gerundensis
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ege03009
]
EM595_1956 (yciL)
Enzymes [BR:
ege01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
EM595_1956 (yciL)
Ribosome biogenesis [BR:
ege03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EM595_1956 (yciL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
CUU24190
UniProt:
A0A0U5L189
LinkDB
All DBs
Position
1:complement(2086365..2087243)
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AA seq
292 aa
AA seq
DB search
MSEKLQKVLARAGHGSRREIETMISAGRVSVDGKIATLGDRVEVDKSMKIRIDGHIVAIT
ESATEVCRVLAYYKPEGELCTRNDPEGRPTVFDRLPRLRGARWVAVGRLDVNTCGLLLFT
TDGELANRLMHPSREVEREYAVRVFGQVDDDKIRQLSRGVQLEDGPAAFKTIKFAGGEGI
NQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDIPLPKGLPRGGWTELELPPINYL
RELVDLPAETVTKVAVEKDRRRTKANQIRRAVKRHSNVSSGSRRTNSNSKRG
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaagttacaaaaagttttagcgcgcgcgggccatggctcacgacgcgaaatt
gaaacgatgatcagcgccggacgcgtcagcgtcgatggcaaaattgccaccctcggcgat
cgcgttgaagtcgacaaatcgatgaaaatccgtattgatgggcacattgttgccatcacc
gaatcggccacggaagtgtgccgtgtgctcgcttactataagccggaaggcgagctgtgc
acgcgcaacgatcccgaaggtcgcccaaccgtatttgatcgcctgccacgcctgcgcggc
gcgcggtgggtagcggtgggtcgtctcgatgttaacacctgtggtctgttgctgttcacc
accgatggtgagctggccaatcgcctgatgcacccaagtcgtgaagttgagcgtgaatat
gcggtacgcgtttttggccaggttgacgatgataaaattcgccagctgagccgcggtgtg
caactggaagatggtccggcagcatttaaaaccatcaagtttgccggcggtgaaggcatc
aaccagtggtacaacgtcacattgaccgaaggccgtaaccgtgaagtgcgccgcctgtgg
gaagccgtgggtgtacaggttagccgtctgattcgtgtgcgttatggcgatattccgttg
ccaaaaggtctgccacgcggtggctggaccgaactggagctgccgccaattaactatttg
cgcgagctggtggatctgcctgcggaaacggtcaccaaggtggcggtagaaaaagatcgc
cgtcgcaccaaggcgaaccagattcgccgggcggtgaaacgtcacagcaatgtcagcagc
ggttcgcgtcgcactaacagcaacagcaaacgcggataa
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