Duffyella gerundensis: EM595_1983
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Entry
EM595_1983 CDS
T04258
Symbol
oppA1
Name
(GenBank) Periplasmic oligopeptide-binding protein precursor
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
ege
Duffyella gerundensis
Pathway
ege01501
beta-Lactam resistance
ege02010
ABC transporters
ege02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EM595_1983 (oppA1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EM595_1983 (oppA1)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EM595_1983 (oppA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ege02000
]
EM595_1983 (oppA1)
Transporters [BR:
ege02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
EM595_1983 (oppA1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF6979
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
CUU24217
UniProt:
A0A0U5L0J2
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All DBs
Position
1:complement(2112175..2113797)
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AA seq
540 aa
AA seq
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MNELSLTRIGTAVAGILFSFTVCAAEVPAGTSLATQQNIVINNGTEVSSLDPQKVEGVPE
SNVILNLLEGLVSTDNNGHVVPGVATSWQQKGTEWIFTLRDDAKWSDGTPVTAEDFVYSW
RRLVDPKTASPYASYAQYAHIANVDEIISGKKSPDTLGVKALDAHRLQVTLSEPVPYLLS
MLTHTAMRPVNARVIARWGDKWTQPDHYVGNGAYTLSEWVVNEKIVLKRNPHYWNNAHTV
IEQGTFLPIASENSDINRYRAGGIDMTNSAVPPELYGRLKKELGGEMRVSPYLCTFYYEI
NNQRAPFNDARVRSAIKLTLDRDIIAQKIMGQGQIPAYGLTPPFTDGAKLTPPAWFGWTQ
QQRNDEAKKLLAEAGYNAGHPLQFTLLYNTSDQNKKQAIAAASMWQKNLGAKVTLQNQEW
KTLLTTRHEGQYDVVRATWCSDYNEPSTFLNMLLSNSSTNTAFYRSPAFDAIMAKTLAAS
DSDARAALYQQAEAQLDKDSAIVPVYYRVSVRLVKPWVGGFTGKDPQDYTDLKYYFIRNH
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagctctcccttactcgcataggcacggctgtcgcaggcattctgttctcattt
actgtctgtgctgctgaggtccctgcgggaacctctctcgctacacagcaaaatatcgtt
attaacaacggcacggaagtttcctcgctggatccgcaaaaagtcgaaggcgtaccggaa
tccaacgtgattcttaatctgctggaagggctggtttcaactgacaataatggccatgtt
gtgcctggcgtggccacatcctggcagcagaagggcacagagtggatcttcaccctgcgt
gacgatgccaaatggagcgacggcacgccggtgaccgctgaggactttgtttatagctgg
cgtcgcctggtcgatcccaaaaccgcatccccttacgccagctatgcgcaatatgcgcac
attgccaacgttgatgagattatcagcggcaaaaaatcccccgataccttaggcgtgaaa
gcgctggatgcgcatcgtttgcaggtcacgctgagtgagccggtgccttatctgctatcg
atgctgacccacaccgccatgcgcccggtcaacgctcgggtcatcgcgcgctggggcgat
aaatggacgcagccggatcactatgtcggcaatggcgcctatacgctgagcgagtgggtg
gtgaatgaaaaaatcgtgcttaagcgtaatccgcactattggaacaacgcgcatacggtg
attgagcagggcacatttttacccatcgcctccgaaaacagcgatatcaaccgttatcgt
gccggcggtatcgatatgaccaacagtgcggtgccgccggagctttatggccgactgaag
aaagagctgggcggtgagatgcgcgtcagcccttatctctgcaccttttattacgaaatc
aataatcagcgcgcgccctttaacgatgcgcgcgtgcgcagcgccatcaagctgacgctt
gatcgtgacatcatcgcgcagaaaatcatggggcagggacaaatcccggcttacggcctg
acgccaccgtttaccgacggtgctaagctcacgccaccggcctggtttggctggacgcag
cagcaacgtaacgacgaagcgaaaaagctgttggctgaagcgggctataacgccgggcac
ccgttgcaatttactctgctctacaacacctccgatcagaataaaaagcaggcgattgcg
gcggcgtcaatgtggcagaaaaatcttggtgcgaaagtcaccctgcaaaatcaggagtgg
aaaacgctgctgaccacgcgtcatgaagggcagtacgacgtggtacgcgccacctggtgc
tctgactataacgagccgtcaaccttcctgaatatgctgctgtcgaactcgtcgaccaac
accgcgttctatcgcagcccggcgttcgacgccattatggcgaaaaccctggcggcatcc
gacagcgatgcacgggcagcgctttatcagcaggcggaagcgcagctggataaggattca
gccatcgtgccggtctactatcgcgtcagcgtacggctggtgaagccgtgggtgggtggg
tttaccggtaaagatccgcaggactacaccgatctgaaatactactttatcaggaatcat
tga
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