Duffyella gerundensis: EM595_1988
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Entry
EM595_1988 CDS
T04258
Symbol
hns
Name
(GenBank) DNA-binding protein H-NS
KO
K03746
DNA-binding protein H-NS
Organism
ege
Duffyella gerundensis
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ege03036
]
EM595_1988 (hns)
03400 DNA repair and recombination proteins [BR:
ege03400
]
EM595_1988 (hns)
Chromosome and associated proteins [BR:
ege03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
EM595_1988 (hns)
DNA repair and recombination proteins [BR:
ege03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EM595_1988 (hns)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
IL15
DUF3037
TPR_IF140_C
DUF6604
Spem1
PaaX_C
HAUS-augmin3
DUF6626
IL2
DUF6280
Motif
Other DBs
NCBI-ProteinID:
CUU24222
UniProt:
A0A0U5L1C1
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All DBs
Position
1:2119232..2119717
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AA seq
161 aa
AA seq
DB search
MQFFFAITTITWQNNSPDEYIKEIKIMSEALKILNNIRTLRAQARECTLETLEEMLEKLE
VVVNERREEDNQTAAENEERTRKLQQYREMLIADGIDPNELLQTMAATKAPGKTKRAARP
AKYHYTDENGEARTWTGQGRTPAVIKKAIEDEGKQLDDFLL
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
ttgcagttcttttttgccatcactactattacctggcagaacaactctcccgatgaatat
ataaaagagattaagataatgagcgaagcccttaaaattttaaacaacatccgcaccctt
cgcgctcaggccagagagtgcaccctcgaaacgctggaagaaatgctggaaaaattagaa
gttgtcgttaatgaacgccgcgaagaagataatcaaaccgcagcagaaaacgaagagcgt
acgcgcaaactgcaacaatatcgtgaaatgctgattgctgacggcattgatcctaatgaa
ttactgcagaccatggcggcgactaaagcacctggcaagaccaagcgtgcggcccgtccg
gctaaatatcactacactgatgaaaatggcgaagccagaacctggactggtcagggccgt
acgccagcggtgattaagaaagctatcgaagatgaaggcaaacagctggatgacttcctg
ctttaa
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