Duffyella gerundensis: EM595_2035
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Entry
EM595_2035 CDS
T04258
Symbol
fadD
Name
(GenBank) acyl-CoA synthetase (long-chain-fatty-acid-CoA ligase)
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ege
Duffyella gerundensis
Pathway
ege00061
Fatty acid biosynthesis
ege00071
Fatty acid degradation
ege01100
Metabolic pathways
ege01212
Fatty acid metabolism
ege02024
Quorum sensing
ege04146
Peroxisome
Module
ege_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
EM595_2035 (fadD)
00071 Fatty acid degradation
EM595_2035 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
EM595_2035 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
EM595_2035 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ege01004
]
EM595_2035 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ege04147
]
EM595_2035 (fadD)
Enzymes [BR:
ege01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
EM595_2035 (fadD)
Lipid biosynthesis proteins [BR:
ege01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
EM595_2035 (fadD)
Exosome [BR:
ege04147
]
Exosomal proteins
Exosomal proteins of breast milk
EM595_2035 (fadD)
Exosomal proteins of breast cancer cells
EM595_2035 (fadD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF4235
Motif
Other DBs
NCBI-ProteinID:
CUU24269
UniProt:
A0A0U5EAK4
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All DBs
Position
1:complement(2161671..2163383)
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AA seq
570 aa
AA seq
DB search
MAIKNEYRGDALNKVWLNRYPADVPAEINADRYESLVGLFEAAVKRYGDRAAFINMGQQM
SFNQLEERSRAFAAWLQQGLGLKKGDRVALMMPNLLQYPVALFGVLRAGMIVVNVNPLYT
PRELKHQLNDSGASAIVIVSNFAHTLEKVVAETAIKQVVLTRLGDQLSPVKGTLVNFVVK
YVKRLVPKYHLPNAISFRDVLQQGKALSYERPAMSNDDLAFLQYTGGTTGVAKGAMLTHR
NMQANLEQTKATYGSVLRDGKELVVTALPLYHIFALTVNGLLFLDLGGTNLLITNPRDIP
GFVKEMAKYPFTAITGVNTLFNALLNDSHFQKLDFSSLRLSAGGGMSVQKVVAERWEKLT
GHYLLEGYGLTECAPLVSVNPYDITCHNGSIGLPIPSTDIRVSDEQGNEVAPGEPGELCI
RGPQVMRGYWQHPEATEEVMKNGWLHSGDIVTVDREGFIRIVDRKKDMILVSGFNVYPNE
IEDVLMQHSKVREAAAIGVPSDLSGEAVKVCVVKKDPSLTKEELLDHCRRQFTGYKVPKI
IEFRDELPKSNVGKILRRELRDEALKKTAS
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcaaaaacgagtatcgaggtgatgcgttgaacaaagtatggcttaaccgctat
ccagctgatgtaccggctgaaattaatgccgatcgctatgaatcactggtcgggctgttt
gaagcggcggtgaaacgctatggcgaccgggcggcctttatcaatatgggccagcagatg
agcttcaaccagctggaggagcgcagtcgtgcgtttgccgcctggttacagcaggggctg
ggtctgaaaaaaggcgatcgcgtggcattgatgatgccgaacctgctgcaatatccggtg
gcgctgtttggcgtcttacgcgccgggatgatcgtggtcaacgtcaatccgctttatacg
ccgcgcgagctgaagcatcagctgaacgacagcggcgccagcgccattgtcatcgtctca
aactttgcgcatacgctggaaaaagtggtagcagagacggcgattaaacaggtagtgctg
acccggctgggcgatcagctgtcgccggtaaaaggcacgctggtcaacttcgtcgttaaa
tatgtcaaacggctggtgccaaaatatcatctgcctaacgccatctcctttcgcgacgtg
ctgcagcagggaaaagcgctgagctacgaacggccagcgatgagcaatgacgatctggcc
tttctgcaatataccggcggcaccaccggcgtggccaaaggcgcaatgctgacccaccgc
aatatgcaggcgaatctggagcagacaaaagcgacctacggttcggtgctccgcgatggc
aaagagctggtagtcaccgcactgccgctgtatcacatctttgcgttgacggtaaacggc
ctgctgtttctcgatctcggcggcaccaacctgctgattaccaacccgcgcgacatcccg
ggctttgtgaaagagatggcgaaatacccctttaccgccattaccggcgttaataccttg
ttcaacgcgctgctgaacgacagccattttcagaagctcgatttctcaagcctgcgcctt
tccgccggtggcggcatgtcggtgcagaaagtggttgccgagcgttgggaaaaactcacc
ggtcactatctgcttgaaggctacggcctgaccgaatgcgcgccgctggtttcggtcaat
ccttacgatatcacctgccataatggcagcatcggcctgccgattccctctaccgacatt
cgggtcagcgatgagcagggcaatgaggtcgcgccgggcgaacccggtgagctgtgcatt
cgcgggccccaggtgatgcgtggttactggcaacatcctgaagccactgaagaagtgatg
aaaaatggatggcttcacagcggcgatattgttaccgttgatcgtgaagggtttatccgc
atcgtcgaccgcaagaaagatatgattctggtctccggatttaacgtctatcccaacgag
attgaagatgtgctgatgcagcacagcaaggtacgggaagccgccgcgattggcgtgccc
agcgacctgtcgggtgaagctgtgaaggtgtgcgtagtgaagaaagatccgtcgctgacc
aaagaagagctgctggatcactgccgccgccagttcaccggctacaaagtacctaaaatc
attgagttccgtgacgaactgccgaaaagcaacgtcggtaaaattttacgccgtgagctg
cgcgatgaagcgttgaagaaaaccgcctcttaa
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