Duffyella gerundensis: EM595_2486
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Entry
EM595_2486 CDS
T04258
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ege
Duffyella gerundensis
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ege03032
]
EM595_2486 (gyrA)
03400 DNA repair and recombination proteins [BR:
ege03400
]
EM595_2486 (gyrA)
Enzymes [BR:
ege01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
EM595_2486 (gyrA)
DNA replication proteins [BR:
ege03032
]
Prokaryotic type
DNA Topoisomerases
EM595_2486 (gyrA)
DNA repair and recombination proteins [BR:
ege03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EM595_2486 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
CUU24717
UniProt:
A0A0U5EBI4
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All DBs
Position
1:complement(2651284..2653920)
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AA seq
878 aa
AA seq
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MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMSKIAHELLADLEKETVDFVPNYDGNEQIPEVLPTKIPNLLVNGSSGIAVGMAT
NIPPHNITEVINGCLAFIEDEDISLEALMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI
YIRARGEVETDAKTGRETIIIHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNNLYSLTQLQTSFGINMVALHQGQPKIMTLKGILEAFVRHRRE
VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAPNPAEAKAGLIAHSWQLGHV
AAMLERAGDNAARPEWLEEQFGIRNGEYFLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLGQIAELIYILENADRLMEVIREELEAMRDAFGDQRRTEITANTADINIEDLINQEDVV
VTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPVREYAEGVNIFMATASGTVKKTTL
TEFSRPRSAGIIAVNLREDDELIGVALTDGSNEAMLFSAAGKVVRFSEQAVRTMGRTASG
VRGIKLAEGDRVVSLIVPREEGAIMTVTQNGYGKRTATAEYPTKSRATQGVISIKVTDRN
GPVIGAVQVVDGDQIMMITDAGTLVRTRVSEVSVVGRNTQGVILIRTAEDENVVGLQRVA
EPVSEEELDTIDGSVAEGEEEIAPEVESDDEAPESDDE
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgcaagagaaattacaccggtcaatattgaggaagaattaaagaattct
taccttgattacgccatgtcggtcatcgttggccgtgccttacctgatgttcgcgatggc
ctgaagcctgtgcatcgccgcgtactttatgcgatgagtgaactcggtaacgactggaac
aaaccttataaaaaatccgcccgtgtggtcggcgacgtcattggtaaatatcacccgcac
ggcgactctgcggtgtacgacacgattgttcgtatggcgcagccgttttcgctgcgttac
atgctggtagatggtcagggtaacttcggttcgattgatggcgactccgctgctgccatg
cgttataccgaagtgcgcatgtccaaaattgctcatgaactgctcgcggatctcgaaaaa
gagaccgtggactttgtgccgaactacgacggcaatgagcaaatcccggaagtgctgccc
accaaaattcctaacttgttggtgaatggctcctcgggtatcgccgtgggcatggcgacc
aacattccgccgcacaacatcaccgaagtgatcaacggctgcctggcctttattgaagat
gaagatatcagccttgaagcgctgatggagcacatcccagggccagatttcccaactgca
gcgatcatcaatggccgtcgcggtatcgaagaagcctatcgcaccggacgcggcaagatt
tacatccgcgcccgtggtgaagtggaaaccgacgctaaaactggccgtgaaaccatcatc
attcacgaaatcccttatcaggtgaacaaagcgcgcctgattgagaagattgccgagctg
gtgaaagagaagcgtgtcgaagggatcagcgcactgcgcgatgagtccgataaagacggc
atgcgcattgtgattgagattaaacgcgatgcggtgggcgaagttgtgctcaacaacctc
tattcactgactcagctgcagacctctttcggcatcaacatggtggcgctgcatcagggc
cagccgaagatcatgacgctgaagggcattctggaagcctttgtgcgccatcgtcgtgaa
gtggtgacgcgtcgtactatttttgaactgcgtaaagcccgcgaccgtgcgcacatcctt
gaaggcctggcgatcgcgctggcgaacatcgacccaattatcgagctgattcgccgtgca
ccaaacccagcggaagcgaaagcagggctgattgctcactcctggcagctgggccacgtg
gccgcaatgctggaacgtgccggtgacaacgcagcgcgtccggaatggctggaagagcag
ttcggcattcgcaacggcgaatacttcctgaccgaacagcaggcgcaggcgattctcgat
ttacgtctgcaaaagctgaccggtcttgagcacgagaagctgctggatgagtacaaagag
ctgctggggcagattgcggagctgatctacattctggaaaatgctgaccgcctgatggaa
gtgatccgtgaagagctggaagcgatgcgtgacgcctttggcgatcagcgtcgtaccgaa
atcacggcgaacaccgcagacatcaacatcgaagacctgatcaatcaggaagatgtggtg
gttacgctgtcgcatcagggctacgtgaagtaccagccgctgaccgattacgaagcgcaa
cgtcgtggcggtaaaggtaaatcagcggcgcgtatcaaagaagaagactttatcgatcgc
ctgttggtcgccaacacgcacgataccattctttgcttctccagccgtggccgtctctat
tggatgaaggtttatcagctgccagaagcgagccgtggcgcgcgtggacgtcctatcgtt
aacctgctgccgctggagccgaacgagcgcatcaccgcgattctgccagtacgcgagtat
gccgaaggggtgaatatctttatggccaccgccagcggtaccgtgaagaaaaccaccctg
accgagttcagtcgtccacgcagcgccggcatcattgcggttaacctgcgcgaagatgac
gagctgattggcgtggcgctcaccgacggcagcaacgaggcgatgctgttctccgctgcc
ggtaaagtggtgcgtttctccgagcaggccgtgcgcaccatgggccgtactgcttcgggg
gttcgcggtatcaagctggccgaaggcgatcgcgtggtgtcactgattgtgccgcgtgaa
gagggcgctatcatgaccgtaacgcaaaacggttacggtaagcgcaccgccaccgccgag
tacccgaccaagtcacgcgccacgcagggcgtgatttcgatcaaagtcaccgatcgtaac
gggccggttatcggcgcggtgcaggtggtggatggcgatcagatcatgatgatcaccgac
gcaggtacgctggtgcgtacgcgcgtttccgaggtgagcgtggtaggtcgaaatacgcag
ggcgtgatcctgatccgtacggcggaagatgaaaatgttgtcggtttgcagcgcgtcgcg
gagcccgtttctgaagaggaactggataccatcgacggcagcgtagcggaaggtgaagaa
gagatcgcgccagaagtggaaagcgatgacgaagcaccagaaagcgacgacgagtaa
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