Duffyella gerundensis: EM595_2710
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Entry
EM595_2710 CDS
T04258
Symbol
rnc
Name
(GenBank) RNase III, ds RNA
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ege
Duffyella gerundensis
Pathway
ege03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EM595_2710 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ege03019
]
EM595_2710 (rnc)
03009 Ribosome biogenesis [BR:
ege03009
]
EM595_2710 (rnc)
03036 Chromosome and associated proteins [BR:
ege03036
]
EM595_2710 (rnc)
Enzymes [BR:
ege01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
EM595_2710 (rnc)
Messenger RNA biogenesis [BR:
ege03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EM595_2710 (rnc)
Ribosome biogenesis [BR:
ege03009
]
Eukaryotic type
90S particles
RNase
EM595_2710 (rnc)
Prokaryotic type
rRNA processing factors
EM595_2710 (rnc)
Chromosome and associated proteins [BR:
ege03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
EM595_2710 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
CUU24941
UniProt:
A0A0U5EBZ6
LinkDB
All DBs
Position
1:complement(2892893..2893573)
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AA seq
226 aa
AA seq
DB search
MNPIVITKLQRKLGYTFIHQDLLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGELKSGGFRRESILADTVEALI
GGIFLDSDIQNVERLILSWYQSRLDEISPGDKQKDPKTRLQEFLQGRHLPLPSYLVVQVR
GEAHDQEFTIHCQVSGMADPVVGTGSSRRKAEQAAAEQALIKLGLE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccatcgtaatcactaagctccagcgtaaactgggctacacttttattcatcag
gatctgttgcagcaggcactcacgcaccgcagtgccagcagcaaacacaatgagcgtctt
gaatttttaggcgactctattctcagctacgttatcgctaacgcgctttatcaccgtttt
ccccgtgtggatgaaggtgatatgagccgtatgcgcgccacgctggtgcgcggcaatacg
ctggcggaaatggcacgagagtttgaccttggcgaatgtcttcgcctcgggcctggtgag
ttaaagagcggcggtttccgtcgcgaatctattctcgccgataccgtagaagcgctgatt
ggcggcatttttctcgacagcgatattcagaatgtcgagcggctaatcctcagctggtat
cagtcacggttggatgaaatcagcccgggtgacaaacaaaaagatcccaaaacgcgcctg
caggaatttttgcagggacgccacttaccgctgccatcgtatttggtagtgcaggtcaga
ggcgaagcgcacgaccaggaatttaccattcactgtcaggtgagcggcatggcggaccct
gtggttggcacaggctccagccgtcgtaaagctgaacaggcagcggccgaacaggcgctg
attaagttaggactcgaatga
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