KEGG   Duffyella gerundensis: EM595_2710
Entry
EM595_2710        CDS       T04258                                 
Symbol
rnc
Name
(GenBank) RNase III, ds RNA
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
ege  Duffyella gerundensis
Pathway
ege03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ege00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    EM595_2710 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ege03019]
    EM595_2710 (rnc)
   03009 Ribosome biogenesis [BR:ege03009]
    EM595_2710 (rnc)
   03036 Chromosome and associated proteins [BR:ege03036]
    EM595_2710 (rnc)
Enzymes [BR:ege01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     EM595_2710 (rnc)
Messenger RNA biogenesis [BR:ege03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     EM595_2710 (rnc)
Ribosome biogenesis [BR:ege03009]
 Eukaryotic type
  90S particles
   RNase
    EM595_2710 (rnc)
 Prokaryotic type
  rRNA processing factors
   EM595_2710 (rnc)
Chromosome and associated proteins [BR:ege03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     EM595_2710 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM DSRM_2
Other DBs
NCBI-ProteinID: CUU24941
UniProt: A0A0U5EBZ6
LinkDB
Position
1:complement(2892893..2893573)
AA seq 226 aa
MNPIVITKLQRKLGYTFIHQDLLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGELKSGGFRRESILADTVEALI
GGIFLDSDIQNVERLILSWYQSRLDEISPGDKQKDPKTRLQEFLQGRHLPLPSYLVVQVR
GEAHDQEFTIHCQVSGMADPVVGTGSSRRKAEQAAAEQALIKLGLE
NT seq 681 nt   +upstreamnt  +downstreamnt
atgaaccccatcgtaatcactaagctccagcgtaaactgggctacacttttattcatcag
gatctgttgcagcaggcactcacgcaccgcagtgccagcagcaaacacaatgagcgtctt
gaatttttaggcgactctattctcagctacgttatcgctaacgcgctttatcaccgtttt
ccccgtgtggatgaaggtgatatgagccgtatgcgcgccacgctggtgcgcggcaatacg
ctggcggaaatggcacgagagtttgaccttggcgaatgtcttcgcctcgggcctggtgag
ttaaagagcggcggtttccgtcgcgaatctattctcgccgataccgtagaagcgctgatt
ggcggcatttttctcgacagcgatattcagaatgtcgagcggctaatcctcagctggtat
cagtcacggttggatgaaatcagcccgggtgacaaacaaaaagatcccaaaacgcgcctg
caggaatttttgcagggacgccacttaccgctgccatcgtatttggtagtgcaggtcaga
ggcgaagcgcacgaccaggaatttaccattcactgtcaggtgagcggcatggcggaccct
gtggttggcacaggctccagccgtcgtaaagctgaacaggcagcggccgaacaggcgctg
attaagttaggactcgaatga

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