Duffyella gerundensis: EM595_2757
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Entry
EM595_2757 CDS
T04258
Symbol
yfiF
Name
(GenBank) putative tRNA/rRNA methyltransferase YfiF
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
ege
Duffyella gerundensis
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ege03009
]
EM595_2757 (yfiF)
03016 Transfer RNA biogenesis [BR:
ege03016
]
EM595_2757 (yfiF)
Ribosome biogenesis [BR:
ege03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EM595_2757 (yfiF)
Transfer RNA biogenesis [BR:
ege03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
EM595_2757 (yfiF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
CUU24988
UniProt:
A0A0U5LRH1
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All DBs
Position
1:complement(2939829..2940887)
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AA seq
352 aa
AA seq
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MNDEFKGKSGKVKVMYVRGDEENKPRGQNPRTGKGGRSDAAGQERDRRPSRPADARGRDR
GEERGISRDQGREGSPWRTVSRPPVDDEASQPAHSGISGKSFIDPVQLRRQRQEESRVYG
ENACHALFQSRPESIVRAWFVQSVTPRFRETLRWLAANRKAYHVVDDEELAKAAGTEHHG
GVCFLIKKRTGMPVKTWLAQAEARDCVLALEDIGNPHNLGGIMRSCAHFGARGVLVNDAS
LLESGAAVRTAEGGAEHVTAISDESFEAGLEAFRRAGYTIVTTSSHKGTPLAEATLPAKM
VLVLGQERDGLSESAWQQGDLSVSIGGTGKVESLNVSVATGVLLAEWWRQNR
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgaatttaaaggcaaaagcggcaaagtcaaagtgatgtatgttcgcggcgat
gaagagaataaaccacgcggacagaatccccgtaccggcaaaggtggccgttcggatgca
gctggccaggagagagaccgtcgtccttcccgtccggcggatgcgcgtggtcgcgatcgc
ggcgaagaacgcggtatctcgcgcgatcagggtcgtgaagggtcgccatggcgcaccgtc
agccggcctccggttgatgatgaagccagccaaccggcgcacagcggtatcagcggcaaa
agctttatcgatccggttcagctgcgtcgtcagcgccaggaagagagccgtgtctatggc
gaaaatgcctgtcacgcactgttccagagccgtccggaaagcatcgtacgcgcctggttt
gtgcagagcgtaacgccgcgttttcgggaaaccctgcgctggctggccgccaaccgcaaa
gcttatcatgtggttgatgatgaagagctggccaaagcggcgggcactgagcatcacggt
ggcgtgtgctttctgatcaaaaagcgcaccggcatgccggtaaaaacctggctggcccag
gcggaagcgcgcgattgcgtgctggcgctggaagatatcggtaacccacataacctcggc
ggcatcatgcgcagctgtgcgcacttcggcgcgcgtggcgtgctggtgaacgatgcgtct
ctgctggagtcgggcgccgcggtgcgtactgctgaaggcggcgccgagcacgtcaccgcg
atcagcgatgagagcttcgaagcgggtttggaagcgtttcgtcgtgcaggctacaccatt
gtgacgacatccagtcacaaaggtacgccgctggcagaagcgacgctgcccgcgaaaatg
gtgctggtgttggggcaggagcgtgatggcctgtcagaaagcgcctggcagcagggcgat
ctcagcgtctccattggcggcacgggcaaagtagaaagcctgaacgtctcggtcgcaacc
ggcgtgttgttggctgaatggtggcgtcagaatcgctaa
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