Duffyella gerundensis: EM595_2938
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Entry
EM595_2938 CDS
T04258
Symbol
speF
Name
(GenBank) ornithine decarboxylase isozyme
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
ege
Duffyella gerundensis
Pathway
ege00330
Arginine and proline metabolism
ege00480
Glutathione metabolism
ege01100
Metabolic pathways
ege01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
EM595_2938 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
EM595_2938 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
EM595_2938 (speF)
Enzymes [BR:
ege01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
EM595_2938 (speF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
CUU25169
UniProt:
A0A0U5GQA8
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All DBs
Position
1:complement(3145789..3147936)
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AA seq
715 aa
AA seq
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MTPLKIAASIALAPVLRLRTIRQIVTLDNTDFTDIAAVVLSLADARSGMLALLRHTGFSL
PVFIQLAPGELPENLPEVTAILRGDEGDGALLEEAAAAYEAALLPPFFDTLTKYVAMENS
TFACPGHQGGAFFKKHPAGRQFFEFFGETLFRADMCNADVKLGDLLIHEGSAKDAQKFAA
KVFNADKTYFVLNGTSSANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPVYLEA
ARNPFGFIGGIDAHCFDEAYLREQIAAVAPERATDVRPFRLAIIQLGTYDGTVYNARQVI
DRIGHLCDYILFDSAWVGYEQFIPVMAACSPLLLELNADDPGIFVTQSVHKQQAGFSQTS
QIHKKDNHLRGQARFCSHKRLNNAFMLHASTSPFYPLFAALDVNAKMHQGPAGRRLWHEC
VIMGIEARKAILSQCEMIRPFLPDSVDGAPWQAAPTETIAGDARYFSFAPGAEWHGFAGY
ARDQYLIDPCKLLLTTPGIDAASGDYADFGIPATILAHYLRENGIVPEKCDLNSILFLLT
PAESREKMAQLVAMLQQFERHVKEDALLSDVLPTIWRKNAVRYADYTLRQLCQEMHDLYV
SYGVKDLQKAMFRQASFPAVAMNPQDANIAFIRGEVELVPIASAQGRIAAEGALPYPPGV
LCVVPGEVWGGAVQRYFLALEAGINLLPGFSPELQGVYSETDDQGAKRLMGYVLR
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgactccgttaaaaattgccgccagcattgcgctggctcctgtgctgcgactgcgcacg
atacgccagatcgtaacgctggataacactgactttaccgacattgccgccgttgtgttg
tcgctggccgatgcgcgcagcgggatgctggcgctgctgcggcataccggcttttcgctg
ccggtatttattcagctggcgccgggggagctgccggaaaatctgcccgaagtcactgcg
atactgcgcggcgatgaaggtgatggcgcgctgctggaagaggccgcggccgcctatgaa
gcggcgctgctaccgccttttttcgatacgctgaccaaatatgtcgcgatggaaaacagc
acctttgcctgtccggggcatcagggcggcgcgttctttaaaaagcatccggccggacgc
cagtttttcgagttctttggcgaaacgctgtttcgtgccgatatgtgcaatgccgacgtg
aagctcggcgatctgctgattcatgaaggatcggcgaaagatgcgcaaaaatttgcggcg
aaggtgtttaacgccgacaaaacctatttcgtgctcaacggcacctccagcgccaacaaa
gtggtgactaacgcgctgctgacccgcggcgatctggtgctgttcgatcgtaataatcac
aagtccaaccaccacggcgcactgattcaggcgggtgccacgccggtttatctggaggcg
gcgcgtaatccgtttggcttcattggcggcatcgatgcgcactgttttgatgaagcgtat
ctgcgtgaacagatcgcagcggtagcgcctgaacgcgccaccgatgtgcggcctttccgg
ctggcgatcattcagctcggcacctatgacggcacggtttataacgcccgccaggtgatt
gaccgcatcggccacctgtgcgactacattctgtttgattcggcgtgggtcggttatgag
cagtttataccggtgatggccgcctgttcgccgctgttgctcgaactgaacgccgacgat
cccggcatttttgtcacgcagtcggtgcataaacagcaggcgggattttcgcaaacctcg
cagattcataaaaaagataatcacctgcgcggccaagcgcggttttgtagccataagcgg
ttgaacaatgcctttatgctgcacgcctcaaccagcccgttttacccgctgtttgccgcg
ctggatgtgaacgccaaaatgcaccaggggcctgcgggtcgccggttgtggcacgaatgt
gtgatcatgggcattgaggcgcgcaaggcgatactcagtcagtgcgaaatgatcaggccc
ttcctgccggatagtgttgacggcgcgccgtggcaggctgcgccaaccgagaccatcgcc
ggtgacgcgcgttacttcagctttgcgccgggcgcagagtggcacgggtttgccggttac
gcgcgcgatcaatatcttatcgatccctgcaagctgctgctcaccacgccaggcatcgat
gcggccagcggcgactatgccgattttggcattccggcgaccatcctcgctcactatctg
cgtgaaaacggcatcgtgccggaaaagtgcgatctgaattcgattctgttcctgctgaca
ccggcggaaagtcgcgaaaagatggcgcagctggtggcgatgctgcagcagttcgaacgg
catgtaaaagaggatgcgctgttaagcgacgtgctgccgaccatctggcgcaagaatgcg
gtgcgctatgcggattatacgctgcgccagctctgtcaggagatgcacgatctctatgtc
agctatggcgtgaaggatttgcaaaaagcgatgtttcgtcaggcgagttttcctgcggtg
gcgatgaatccgcaggatgccaatattgcgtttattcgcggcgaagtggagctggtaccg
atcgccagcgcacaggggcgcattgcggccgaaggcgcattgccttatccaccgggtgtg
ctgtgcgtggtgccgggcgaagtgtggggcggggcggtgcagcgttattttctcgcactg
gaagcgggcatcaatttgctgccgggcttctcgccggagctgcagggcgtttacagcgaa
acggatgaccagggagcgaaaaggctgatgggctacgtcctgcgttga
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