Duffyella gerundensis: EM595_3107
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Entry
EM595_3107 CDS
T04258
Symbol
yjeR
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ege
Duffyella gerundensis
Pathway
ege03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EM595_3107 (yjeR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ege03019
]
EM595_3107 (yjeR)
03009 Ribosome biogenesis [BR:
ege03009
]
EM595_3107 (yjeR)
Messenger RNA biogenesis [BR:
ege03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EM595_3107 (yjeR)
Ribosome biogenesis [BR:
ege03009
]
Eukaryotic type
Pre-60S particles
RNases
EM595_3107 (yjeR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
CUU25338
UniProt:
A0A0U5L3H7
LinkDB
All DBs
Position
1:complement(3343838..3344383)
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AA seq
181 aa
AA seq
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MSGNENNLIWIDLEMTGLDPERDRIIEIATLITDANLNILAEGPVMAVHQSDEQLALMDD
WNVRTHTNSGLVTRVKASEFDDRAAELATLAFLQKWVPANTSPICGNSIGQDRRFLFKYM
PELEAYFHYRYLDVSTLKELARRWKPDILPGFKKTGSHQAMDDIRESVAELAYYREHFIQ
P
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaaatgaaaacaatctgatttggatcgaccttgaaatgaccggtctcgatccg
gagcgcgaccgcattatcgaaatcgcgacgctgattaccgatgccaatctgaatatcctg
gcggaaggcccggtgatggcggtgcatcagagcgatgagcagctggcgctgatggatgac
tggaatgtgcggacgcacaccaacagtgggctggtgacgcgggtcaaagcgagtgagttt
gacgatcgcgcagcggagctggccacgttagcgttcctgcagaagtgggtgcccgctaac
acttcgccgatctgtggcaacagcatcggccaggatcgccgttttctgtttaaatatatg
ccggagctcgaagcgtacttccactatcgctatcttgatgtcagcacgctgaaagagctg
gcccgccgttggaagccggacattctgccgggctttaaaaaaaccggcagccatcaggca
atggatgacattcgcgaatcggtggctgagttggcctactatcgcgaacattttattcag
ccgtaa
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