Duffyella gerundensis: EM595_3118
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Entry
EM595_3118 CDS
T04258
Symbol
groEL
Name
(GenBank) 60 kDa chaperonin (groEL protein)
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ege
Duffyella gerundensis
Pathway
ege03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EM595_3118 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ege03019
]
EM595_3118 (groEL)
03110 Chaperones and folding catalysts [BR:
ege03110
]
EM595_3118 (groEL)
03029 Mitochondrial biogenesis [BR:
ege03029
]
EM595_3118 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ege04147
]
EM595_3118 (groEL)
Enzymes [BR:
ege01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
EM595_3118 (groEL)
Messenger RNA biogenesis [BR:
ege03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
EM595_3118 (groEL)
Chaperones and folding catalysts [BR:
ege03110
]
Heat shock proteins
HSP60 / Chaperonin
EM595_3118 (groEL)
Mitochondrial biogenesis [BR:
ege03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
EM595_3118 (groEL)
Exosome [BR:
ege04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EM595_3118 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
EM595_3118 (groEL)
Exosomal proteins of breast cancer cells
EM595_3118 (groEL)
Exosomal proteins of colorectal cancer cells
EM595_3118 (groEL)
Exosomal proteins of bladder cancer cells
EM595_3118 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
CUU25349
UniProt:
A0A0U5L8C9
LinkDB
All DBs
Position
1:complement(3354234..3355880)
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGI
DQAVIAAVEQLKNLSVPCSDSKAIAQVGTISANSDETVGMLIAQAMEKVGKEGVITVEEG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGAIELDSPFILLADKKISNIRELLPVLEAV
AKSSKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
ISEEIGMELEKATLEDMGQAKRVVINKDTTIIIDGVGEETAINGRVSQIRQQMEEATSDY
DKEKLQERVAKLAGGVAVLKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALV
RVASKLSELRGQNEDQNVGIKVALRAMESPLRQIVSNAGEEPSVVTNNVKAGEGNYGYNA
QTEEYGDMIEFGILDPTKVTRSALQYAASVAGLMITTECMVTDMPKSDAPDLGGAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggtaacgacgcccgtgtgaaaatgctgcgcggcgta
aacgtactggcagatgcagtaaaagttaccctgggcccaaaaggccgtaacgtagtactg
gataaatctttcggtgcaccgaccatcactaaagatggcgtttccgtagcacgtgaaatc
gaactggaagacaagtttgagaacatgggcgcgcagatggtgaaggaagttgcctctaaa
gcgaacgacgctgcaggcgatggtaccaccaccgcgaccgtgctggcacagtccattatc
accgaaggcctgaaagccgttgcggcgggcatgaacccgatggatctgaaacgcggtatc
gaccaggcggttatcgctgcggttgaacagctgaaaaacctttctgttccttgctccgac
tctaaagcgattgctcaggtgggtaccatctctgcaaactccgatgaaactgtcggtatg
ctgattgcgcaggcaatggagaaagtaggtaaagaaggcgttatcaccgttgaagaaggc
accggcctgcaggacgagctggacgtggttgaaggtatgcagttcgaccgtggttacctc
tctccttacttcatcaacaagccggaaactggcgctatcgaattagacagcccattcatc
ctgctggctgataagaaaatctctaacattcgcgaactgctgccagtactggaagcggtt
gctaaatcaagcaagcctctgctgatcatcgctgaagatgttgaaggcgaagcgctggca
acgctggtggttaacactatgcgcggcatcgtgaaagtggctgcggttaaagcacctggc
tttggcgatcgtcgtaaagcgatgctgcaggatatcgctatcctgaccggcggtaccgtg
atctctgaagagatcggtatggagctggaaaaagcaacgctggaagatatgggccaggcg
aagcgcgtggtgatcaacaaagacaccaccatcatcattgatggcgtcggcgaagaaacc
gccatcaacggtcgtgtctcgcagatccgtcagcagatggaagaagctacctctgattac
gacaaagaaaaactgcaggagcgcgtagcgaaactggcaggcggcgttgccgttctgaaa
gtaggcgcagccactgaagttgaaatgaaagagaagaaagcgcgcgttgaagatgctctg
catgcaacccgtgcagcggtagaagaaggtgtggtagcaggcggcggcgttgcgctggtt
cgcgtagcttctaaactctctgaactgcgtggccagaacgaagaccagaacgtgggtatc
aaagttgcgctgcgcgcgatggaatccccactgcgtcagatcgtttctaacgccggtgaa
gaaccttctgtagtgaccaacaacgtgaaagcgggcgaaggtaactacggctataacgca
cagaccgaagaatacggcgacatgattgagttcggtatcctggacccaaccaaagtgacc
cgttctgcactgcagtacgcggcatctgttgctggcctgatgatcaccaccgaatgtatg
gtgactgacatgccaaaaagcgacgcgcctgatttaggcggcgctggcggtatgggtggc
atgggcggtatgggcggcatgatgtaa
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