Duffyella gerundensis: EM595_3185
Help
Entry
EM595_3185 CDS
T04258
Symbol
uvrA
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
ege
Duffyella gerundensis
Pathway
ege03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EM595_3185 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ege03400
]
EM595_3185 (uvrA)
DNA repair and recombination proteins [BR:
ege03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EM595_3185 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EM595_3185 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_25
AAA_23
Viral_helicase1
AAA_21
ScfRs
T2SSE
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
CUU25416
UniProt:
A0A0U5L7W2
LinkDB
All DBs
Position
1:3432688..3435516
Genome browser
AA seq
942 aa
AA seq
DB search
MDKIEVRGARTHNLKNINLTIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PDHDVTLAAQTVSQMVDNVLALPEGSRLMLLAPVVKDRKGEHSKTLENLAAQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVIDRFKVRDDLSTRLAESFETALEMSGGTAIVADMDDS
SVEELLFSANFACPICGYSMSELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVVQNPEL
SLAGGAIRGWDRRNFYYFQMLRSLAEHLQFDVEEPFNTLSEKAQQVVLYGSGKENIEFKY
INDRGDTSVRRHPFEGVLHNMERRYKETESSAVREDLAKFISNRACATCEGTRLRREARH
VYVENTTLPTISDMSIGHAMEFFQNMKLSGQRAQIAEKVLKEIGDRLRFLVNVGLNYLSM
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLETLIHLRNLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGQVVAEGTVDDIMAQEASLTGQYLSGKRGIRV
PEQRVQGDPSKVLKITGARGNNLKDVTLTLPVGLFTCVTGVSGSGKSTLINDTLFPIAQR
VLNGATIAEPAPYREVSGMDHFDKVIDIDQSPIGRTPRSNPATYTGIFTPVRELFAGVPE
ARSRGYNPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEVKY
KGKSIHEVLEMTIEEAREFFDAVPALARKLQTLIDVGLSYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLEVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVAECEKSHTARFLKPLLTQ
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggataagattgaagtccgtggggcgcgtacccacaatttgaaaaacatcaacctgacc
atcccgcgcgacaagctgattgtcgtcaccggcctgtcaggttcaggcaagtcctcgctg
gcgtttgatacgctttatgccgagggccaacgccgttatgtagaatccctctctgcttat
gcccgtcagttcctgtcgctgatggagaagcccgatgtcgatcacatcgaaggcttgtcg
cctgctatttccattgagcagaagtccacttcacataacccacgatcaaccgtcggcacc
attaccgagattcacgactacctgcgcctgctgtttgcacgcgttggcgagccgcgctgt
cccgatcacgatgtcacgctggccgcgcaaaccgtcagtcagatggtggacaacgtgctg
gcactgccggaaggcagccgcctgatgctgctggcaccggtggtgaaagatcgtaaaggc
gagcacagcaaaacgctggagaatctggcggcgcagggttacatccgtgcacgcatcgat
ggcgaagtgtgcgatctctccgatccgccgaagctggaactgcagaagaagcacaccatc
gaagtggttatcgatcgctttaaagtacgcgacgatctttccactcgcctggctgaatcc
tttgagaccgcgctggagatgtccggcggcacagcgatcgtcgcggacatggacgacagc
agtgttgaagagctgctgttctcggccaactttgcctgcccgatttgtggttacagcatg
agtgagctggagccgcgcctgttttcgtttaacaacccggcgggcgcctgccctacctgc
gacggcctcggcgtacagcaatatttcgatcccgatcgcgtggtgcaaaacccggaattg
tcactggccggcggcgcgattcgcggctgggatcgccgtaatttctactatttccagatg
ctgcgttcccttgctgagcacctgcagtttgatgtggaagagccgttcaacacgctgagc
gaaaaagcgcagcaggtggtgttatacggttccggcaaagagaacatcgaatttaagtac
atcaacgatcgcggcgatacctcggtgcgtcgtcatccgtttgaaggcgtgctgcataac
atggagcgccgctataaagaaaccgaatcttcggcggtgcgcgaagatctggcgaagttc
atcagcaaccgcgcctgcgccacctgcgaaggcacgcgtctgcgtcgcgaagcgcgtcac
gtgtacgttgaaaacaccacgctgccgaccatctctgacatgagcattggtcatgcgatg
gagttttttcagaacatgaagctcagcggtcagcgggcacaaatcgccgagaaggtgctg
aaagagattggcgatcgcctgcgcttcctggtgaacgtcggccttaactacctgtcgatg
tcccgttccgctgaaacgctctccggcggtgaagcgcagcgtattcgtctggccagccag
attggcgccggtttagttggcgttatgtacgtgctggatgagccatcaattggcctgcat
cagcgcgataacgaacgcttgctggagacgctgattcatctgcgtaacctcggcaacacg
gtgatcgtggttgagcatgatgaagatgcgattcgtgctgcggaccatgtgatcgatatc
ggtcccggcgcgggcgtgcatggtggtcaggtggtggctgaaggcaccgtcgatgacatc
atggcgcaggaagcgtcgttgaccggccagtatctcagcggcaaacgcggtatccgcgtg
ccagagcagcgcgtgcagggcgatccgtccaaggtgctgaaaatcaccggcgcacgcggc
aacaacctgaaagatgtcacgctgacgctgccggttgggctgtttacctgcgtcaccggc
gtatcgggatccggcaaatccacgctgatcaacgataccctgttcccgatcgctcagcgc
gtgctcaacggtgccaccatcgccgagccagcgccttaccgtgaagtcagcggtatggat
cattttgataaggtgatcgacatcgatcaaagcccgattggacgcacaccgcgatccaac
ccggccacctacaccggcatctttacgccagtgcgcgaactgtttgctggcgtgccggaa
gcgcgttcacgcggctacaatccgggccgcttcagctttaacgtgcgcggcggacgctgc
gaagcctgtcagggcgatggcgtgatcaaagttgagatgcacttcctgccggatatctat
gtgccgtgcgaccagtgtaaaggtaagcgttataaccgtgaaacgctggaagtgaagtac
aaaggtaaaagcattcatgaagtgctggagatgaccattgaagaggcgcgcgagttcttt
gacgcggtgccagcgctggcacgtaagctgcaaacgctgatcgatgtgggcctctcttat
attcgtcttggtcagtcagccactacgttgtcaggcggtgaagcccagcgcgtgaagctg
gcacgtgagctgtcgaaacgcggcaccggccaaacgctctatattctggatgagccgacc
accggtctgcactttgccgatatccagcagctgctggaagtgctgcatcagctgcgcgac
cagggcaataccatcgtagtgattgagcacaatctcgacgtgatcaaaaccgctgactgg
attgttgatctgggtccggaaggcggcagcggcggcggcgagattctggtttctggtaca
ccggaaacggtggcggaatgcgagaaatcacacactgctcgcttcctgaaacctctgtta
acacaataa
DBGET
integrated database retrieval system
