Duffyella gerundensis: EM595_3283
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Entry
EM595_3283 CDS
T04258
Symbol
fadB
Name
(GenBank) enoyl-CoA hydratase / dodecenoyl-CoA delta-isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
ege
Duffyella gerundensis
Pathway
ege00071
Fatty acid degradation
ege00280
Valine, leucine and isoleucine degradation
ege00310
Lysine degradation
ege00362
Benzoate degradation
ege00380
Tryptophan metabolism
ege00410
beta-Alanine metabolism
ege00640
Propanoate metabolism
ege00650
Butanoate metabolism
ege00907
Pinene, camphor and geraniol degradation
ege00930
Caprolactam degradation
ege01100
Metabolic pathways
ege01110
Biosynthesis of secondary metabolites
ege01120
Microbial metabolism in diverse environments
ege01200
Carbon metabolism
ege01212
Fatty acid metabolism
Module
ege_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
EM595_3283 (fadB)
00650 Butanoate metabolism
EM595_3283 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
EM595_3283 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
EM595_3283 (fadB)
00310 Lysine degradation
EM595_3283 (fadB)
00380 Tryptophan metabolism
EM595_3283 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
EM595_3283 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
EM595_3283 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
EM595_3283 (fadB)
00930 Caprolactam degradation
EM595_3283 (fadB)
Enzymes [BR:
ege01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
EM595_3283 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
EM595_3283 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
EM595_3283 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
EM595_3283 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
CUU25514
UniProt:
A0A0U5L409
LinkDB
All DBs
Position
1:3560292..3562475
Genome browser
AA seq
727 aa
AA seq
DB search
MLYQSDTLSLDWLTDGIAELVFNAPGSVNKLDTATVANLGEALTLLENEPALRGLLVSSR
KPAFIVGADITEFLTLFSAPANQLTDWLNDANAIFNRLEDLPVPTLTAVNGYALGGGCEC
VLATDFRVATPDTRIGLPETKLGIMPGFGGSVRLPRLIGADNALEIIAAGKEVDAANALS
LGLVDAIVAPEKLAAAALRMLQAAIEEQSWRARRAPKLQPLKLSAVEAKMSFTTAKALVM
QTAGKHYPAPLTAVKTIEAAAHLGRDGALKLETAAFVPLAQSNEARALVGIFLNDQWVKS
KAKKLAQSARSPQQAAVLGAGIMGGGIAYQSAAKGVPVRMKDIRENALTLGMQEAGKLLN
KQLERGKITGAQLTRIIASIQPTLSFADFDRVDIVVEAVVENPTVKRAVLQETEGQVRSD
TIIASNTSTIPIGDLAQALKRPENFCGMHFFNPVHRMPLVEIIRGEKTADSTLAQVIGWA
LKMGKTPVVVNDCPGFFVNRVLFPYFAAFNLLLRDGADFRQIDKVMEKTFGWPMGPSWLL
DIVGIDTAHHAQQVMADGFPTRMKTPEQNAIDLLFAAQRYGQKNGSGFWRWETDKKGKAV
RQPDAEIAALLQPICQPARSFSDEEIIARMMIPMLNEVVRCLEENIIASPAEADMALVHG
LGFPPFHGGALRYLDTLGNARFVEMAQHYAALGPLYTPPALLLQKAEQHESWYPATPARA
HQPLKSV
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgctttatcaaagcgataccctttctctcgactggcttaccgatggcatcgccgagctg
gttttcaatgcgccaggctcggtgaataaactcgataccgccacggtagctaatctgggc
gaagcccttaccctgctggaaaatgaacccgcgctgcgtggcctgctggtgagttcacgc
aagcccgcctttattgttggcgccgatatcaccgagtttttgacgctgttttccgctccg
gccaaccagctgactgactggctgaatgacgccaatgcgattttcaaccgactggaagat
ctgccggtgcctacgctgaccgccgttaatggttatgcgctgggcggcggttgcgaatgt
gtactggccaccgactttcgcgttgccactccggatacgcgcatcggcctgccagaaacc
aagcttggcatcatgcccggctttggtggctccgtccgcctgccgcgtttgatcggtgcg
gataacgcactggaaatcatcgcagcgggcaaagaggtggatgccgccaacgcgctgtcg
ctgggtctggtcgatgccattgtcgcgccggagaagctggctgcggcggcgctgcgcatg
ctgcaggcagcgatcgaggagcaaagctggcgggcacgccgtgcgcccaaactgcagcca
ttaaagctctcagcagttgaagcgaaaatgagctttaccactgctaaagcgctggtgatg
cagacggccggtaagcactaccctgcgcccttgactgcggtcaaaaccattgaagcagcg
gcgcatctgggacgcgacggcgcgttgaagctggaaacggctgcctttgttccgctggcg
cagtcaaacgaagcacgcgcgctggtcggcattttcctcaacgatcagtgggtcaaaagc
aaagccaaaaagctcgcacagtcggcacgttcgccacaacaggcggcggtgctgggtgcc
ggaattatgggcggcggcatcgcttatcagtctgccgccaaaggtgtgccggtgcgcatg
aaagatattcgcgaaaatgcgctgacgctggggatgcaggaagcgggcaagctgctgaac
aagcagttggaacgcggcaaaattactggcgcacagctcacccgtatcattgccagcatt
caaccaacgctcagcttcgccgacttcgatcgggttgatatcgtggtggaagcggtggtg
gaaaatccaacggtaaaacgtgcggtgttgcaggagaccgaaggtcaggtacgcagcgat
accatcattgccagcaatacctcgaccattccaattggcgatcttgctcaggcgttgaag
cggccggaaaatttttgcggcatgcactttttcaacccggtgcaccgtatgccgctggta
gaaattattcgtggcgagaaaactgccgacagcacgctggcgcaggtgattggctgggcg
ttgaaaatgggtaaaacgccggtggtggttaacgactgtcccggatttttcgtcaaccgc
gtgctctttccctattttgctgcctttaatctgctgttacgcgacggcgctgatttccgt
cagatagataaggtgatggaaaaaacttttggctggccaatggggccatcatggctgctg
gacatagtaggcatcgacaccgctcatcatgcccagcaggtgatggccgatggtttcccg
acgcgcatgaagacgccagagcagaatgccatcgatctgctgtttgccgcccagcgttac
ggtcagaaaaacggcagcggattctggcgctgggaaacagacaaaaaaggcaaggcggtc
aggcagcccgatgccgaaatcgctgcgttgctacagccgatatgtcagccggcgcgttcc
ttcagcgacgaggagatcatcgcccgcatgatgattcctatgctgaatgaagtggtgcgt
tgcctggaagaaaatatcatcgcctcaccagcggaagcggatatggcgctggttcatggt
cttggcttcccgccgtttcatggcggcgcactgcgctatctcgatacgctcggcaacgcg
cggtttgttgagatggcgcagcactatgccgcgcttggcccgctctatacgccgcccgct
ctgctactgcaaaaagcggagcagcacgaaagctggtatccggccacgcccgcgcgtgct
catcagccgctgaaaagcgtgtaa
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