Duffyella gerundensis: EM595_p0202
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Entry
EM595_p0202 CDS
T04258
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
ege
Duffyella gerundensis
Pathway
ege02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EM595_p0202
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Gene cluster
GFIT
Motif
Pfam:
Big_13
Big_6
DUF4625
BapA_N
Bact_surface_Ig-like
Y_Y_Y
InlK_D3
Motif
Other DBs
NCBI-ProteinID:
CUU25902
UniProt:
A0A0U5L649
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All DBs
Position
pEM01:complement(197507..203089)
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AA seq
1860 aa
AA seq
DB search
MAYSGTGRVTVVSLASGQPLPPFSEGDSRSILNEPAIITLQGPPAQVAAYQQQGDDLILR
FKDSDTVRYQQFFSQIDGRHSELRFQHDNAVHQVQFADTAAGDSATLTTLLPVLSAPDLS
NSASPETHSTAAASIAPNHNDAAVTALNSDAPPVSTLTAAPSTMPSTLAAAANEPGADAL
PVLHLDPIADDNAVNYQEGVYGVLFAGTTENLPTGSIVTVTLNGKRWESGVNENQWHIQI
NDSELRDIKDGNYRATVSVVDKQGNSTSLSRDLLLITHYNSGKPTVTVNDVTLADAVEHD
GQTWYRLSGTLEAPLPIKSFAVQSDYLMNWHDGVLHADGSWSVEVSASDLSEGNNSLTFG
VQDGAGNWLEQGLYVSADLTTPAEPHDPGEVPLPGDNPGDTPPVDGGETTPPPVSGPPSL
TIHSFTGDAVLSADEKFTAQTLSGTTQNLAPGSTLTVQLNGESYTTTLAADGSWSLAIPA
ADLQTLPVGSSRISVSFDNSVGGTTTLSKAITVEASVPPDGAPVPQPTIETPFGDGLMSS
TESYHAQMITGTTGVTGAGQKIALTIDGISYAGTVDAEGRWSVPVGSDPNYGAPSSNGKH
EIVLTATDVWGQTGTAVTHYIADIEAPRVSVDVLAGDGLIDLTEINSPLLISGSGESGCA
IEVTFGSTVWKGTIDSYGEWQFTVPAETLQSMGEGRFGAVARVTDAAGNSSFDVGGVDIY
ASEVLPQLTLDPVTGDNAVSYQEGIYGIMFTGSAAHLPSGTLIDLTLNGKTFYGSVNENE
WRVQISDNDVKSIKDGNYAITVSATDPNGNSTSLSQDLLLITHYKSSNPTFTVNTLTLAD
AVEHDGQTWYRLSGTMETPLPIKSFAVQSDYLLNWHDGVMHADGSWSVEISADDLSQYTT
TLTFGVLDGASNWFEQSVTIPVDFTTPADPHDPGEVPVPGDNPGDTPPVDGGDTTPPPVS
GPPALTIHSFTGDAVLSAEEKQSAQTLSGMTMNLAPESTLTVKLNGESYTTTLAADGSWS
VTIPAADLQVLPVGANRISVSFDNSVGGVTTAVKNITVEASVPPDDAPTPQPTIETPFGD
GLMNLEESSHPVTLTGTTGVIGAGQKIALTIDGINYAGTVDSEGRWSVPLSSDQMREANF
RNGEHQIELIATDVWGQTGTATTRFTIDTVGPAIDINWLSDDGIIDFTEITSPLLISGSG
EAGSTIEVTFGSIVWNSTIDSSGHWQFTVPAETLQSMGEGRFMAEVHATDAAGNSQVRST
EVEIYPTEKLPQLTLDPVTGDNAVNYQEGLYGIMFTGSAAYLPYYTRVELTLDGKTFVGN
VAGDEWRVEISDADVRSIKDGNYTITVSATDAKGNSASLSQDLLLITHYNSSFPTLTFNT
ITLADAVEHNGQTWYRLTGTIEAPLPIKSFSVQSSYLENHEQAVIQADGSWSVEIPAQDI
SHYTNTMTFGVFDGAGNWYEKDMVVPVDLTPPVDGGGPILLPAPTIDTPFDDGWLNRSEK
QHSETLTGTTGISGSGQAVKVIIGGKTYAATVTDDGKWSLTLTPEMMKTGFGNGKHGIIV
TATDASAHSATINASYTVDACPPKISFSHLADGQKINLNEGLLIAGKGEAGDAVIVTLGE
HHWQTNVTNAGSWSVQLDAAEAHTLASGDYALTASIQDAAGNIGHAALNVALYNEVAQPQ
LAVAPNDVLAAATDEKPIEVADHSAVENPGVNPDVLSAAGLGSHDAFSLLFLHTLTSPDG
SADHDMLRMTGSHEVLDFATLGLKISGVEAIDLGSAGSNSVTLGQKDLLQLSDNASDSLT
IKGAEGNAVTLSTKEGGVWQEDGQRLVDGQQYDLYHTTAVGHEGSLADVLIQHNLQVQIV
NT seq
5583 nt
NT seq
+upstream
nt +downstream
nt
atggcgtattcaggcacaggccgcgttactgtcgtatcgctggccagcggtcaaccactg
ccgccgttcagtgaaggtgattcccgatccattcttaacgagcctgcaattatcacgctg
caaggcccgcctgcccaggttgcggcttatcagcagcagggcgacgatctgatcctgcgt
tttaaggacagtgataccgttcgctatcagcagttttttagccaaatcgacggcaggcac
agcgagctacgttttcagcatgacaatgctgttcatcaggtgcagtttgcagacaccgcc
gcgggcgactctgcaacccttaccacgctgctgccggtgttgagtgcgcctgacctcagc
aactcagcgtcaccggaaacccacagcactgcggccgcctctatcgcccctaaccataac
gatgcagctgtcacggctttgaacagcgacgcgccgcccgtttcaaccctgaccgccgca
ccatcaaccatgccatcaacgctggctgctgccgcgaatgaacccggggcggatgcgtta
ccggtgctgcatctcgatccgatcgctgatgataatgcggtgaactatcaggaaggtgtc
tacggcgttctgtttgccggcaccacagaaaatctgcccaccggttccattgtcacggtc
acactgaatggcaaacgctgggaaagcggcgtcaatgaaaatcagtggcacatacagatt
aacgacagcgagctcagggatattaaagatggcaactaccgtgccacggtgagcgttgtt
gataaacagggaaacagcaccagcctcagccgggatctgctgctgattactcactacaac
agcggtaaacctaccgtcaccgttaacgacgtcacgctggcggatgcggtagagcacgac
ggtcaaacctggtaccggctcagcggcaccctggaggcgccgctgccgataaaatcgttc
gccgtacagagcgattacctgatgaactggcacgatggcgtgctccacgccgacggcagc
tggagcgtggaagtcagcgccagtgacctcagcgaaggcaacaatagcctgacattcggc
gtgcaggacggcgccggaaactggcttgagcaggggctctatgtgtcggccgatctgacc
acgcccgctgaaccgcacgatccgggcgaggtgccgctgccgggcgacaatcctggcgat
acgccgccggtggatggcggtgaaaccacgccgccgccggtcagcggcccgccgtcatta
accatccacagttttaccggcgatgcggtgctgagcgccgatgaaaaattcacggcgcaa
acgctgagcggcaccacgcagaatctggcgccgggaagtacgctgaccgttcaactgaat
ggtgagagctacaccaccacgctggccgccgacggcagctggagcctggctattccggcg
gccgatctgcaaacgctgccggtgggtagcagccgcatcagcgtcagttttgacaacagc
gttggcggtaccaccacgttgagcaaagcgatcaccgtggaagcctccgtgccgccggat
ggcgcaccggtgccacagcccaccattgaaacgccgtttggcgacgggttgatgagctcc
actgagagttatcacgcccagatgatcaccggcaccaccggcgtgaccggcgccggacag
aaaatcgcgctgaccattgacggcatcagctatgcgggcaccgtggatgccgaaggtcgc
tggagcgtgccggtgggctctgatcctaattacggtgcgccttcatccaacggcaagcat
gagattgtgttgaccgctaccgacgtgtgggggcaaaccggcactgccgtgacccactac
attgctgatattgaagcacctcgcgtcagtgttgatgtgctggcaggggacggcctgatc
gacctcaccgaaattaactcgccgctgctgatctcgggcagcggtgaaagcggctgcgcc
attgaggtgacatttggtagcacggtctggaaaggcactatcgattcatacggtgagtgg
cagtttacggtaccggcggaaacgctgcagagcatgggtgaaggccgctttggtgcggtg
gcccgtgttacggatgcggcaggtaacagcagctttgatgttggcggcgtagatatttat
gcctctgaggtgctgccgcagctgaccctcgatccggtcaccggcgacaatgcggtcagc
tatcaggaaggcatctacggcattatgttcaccggcagcgcagcgcatctgccgagcggc
acgctgattgatctgacgctgaacggcaaaaccttttacggcagcgtaaacgagaatgag
tggcgggtgcagatttctgacaatgacgtgaagtcgataaaagatggcaactatgccatc
acggtcagcgccacggatccaaatggcaatagcaccagcctcagtcaggatctgctactg
attacccattacaaaagcagtaatccgacatttaccgttaacacgctgacgttggcagat
gcggtagagcacgacggacagacctggtaccggctcagcggcaccatggaaacgccgcta
cccattaagtcgttcgcagtacagagtgattatttgctgaactggcacgatggcgtgatg
cacgctgacggtagctggagcgtggaaattagcgcggatgatctcagccaatacaccacc
acgctgacgtttggcgtgctggacggcgccagcaactggttcgagcagagcgtcaccatt
ccggtcgacttcacgacgcccgctgacccgcacgatcccggcgaggtaccggtgccgggt
gataatcctggcgatacaccgccggtggatggcggtgacaccacgccgccaccggtcagc
ggcccgccagcgctgactattcacagtttcaccggcgatgcggtgctcagcgctgaagag
aagcagtcggcacaaaccctgagcggtatgactatgaacctggcgccggaaagcacgctg
accgtgaagctgaacggcgaaagctacaccaccacgctggccgccgacggcagctggagc
gtcactattccggcggccgatttgcaagtgctgccggtgggcgcaaaccgcatcagcgtc
agctttgacaacagcgtaggcggcgtcaccacggcggtcaaaaatatcaccgtagaagcc
tcggtgccgcctgatgatgcgccaacgccacagcccaccattgaaacgccgttcggcgac
gggcttatgaatttagaggagagttcgcatcccgttacgctcaccggcaccaccggcgtg
atcggtgccggacagaaaatcgcgctgactatcgacggcatcaattatgcagggaccgtg
gacagcgaaggtcgctggagcgtgccgctctcgtcggatcagatgcgcgaagccaatttc
cgtaatggcgagcaccagattgagctaatcgctaccgatgtctgggggcagaccggcacg
gcgacgacccgcttcacgatcgatactgttggtccggcgattgacataaactggctgtca
gatgacggcataatcgacttcacggaaatcacttcgccgctgctgatttcaggtagcggt
gaggcgggcagcaccattgaggtgacctttggcagcatcgtctggaacagcactatcgat
tcaagcggccactggcagttcaccgtgccagcagaaacgttgcagagcatgggcgagggc
cgctttatggcggaggttcatgccaccgacgcagcgggaaatagccaagtcagatcaacg
gaagtggagatatatcccacagagaaactgccgcagctgacccttgatccggtcaccggt
gacaacgcggtcaactatcaggaaggcctttacggcattatgttcaccggcagtgcggct
tacctgccgtactatacgcgggttgaactgacactggacggcaaaacctttgtgggtaac
gtggccggggatgagtggcgggtggagatctctgacgctgatgtgagatcgattaaagac
ggcaactacaccatcacggtcagcgccacggatgcaaaaggcaacagcgccagccttagc
caggatctgctgctgatcacccattacaacagcagcttcccaacactcacctttaatacc
atcacgctggcggatgcggtagagcacaacggacagacctggtatcggctgaccggcacc
atagaggcaccgctgccgataaaatcgttctcggtgcagagtagttacctggagaaccat
gaacaggctgtcattcaggcggacggcagctggagcgtggagatccccgcgcaggacatc
agccactacaccaataccatgacgtttggggtgtttgatggtgctggcaactggtacgag
aaggatatggttgtgccggttgacctgaccccgccggttgatggcggcggcccgatcctg
ctgccagcgcccaccatcgatacgccattcgacgatggctggttgaaccgcagcgagaaa
cagcatagcgagacactgaccggtaccaccggtatcagcggtagcggccaggcggttaag
gtgatcatcggcggtaaaacgtacgcggccacggtcaccgacgacggtaaatggagcctg
accctgacgccagagatgatgaaaaccggttttggtaacggtaagcacggcattattgtg
accgcaaccgatgcgtcagcgcattcagcaaccatcaatgccagttacaccgtcgatgcc
tgtccgccaaaaatcagcttttcgcatctggcggacggtcagaagatcaatctcaatgaa
gggctgctgatcgcaggcaaaggtgaagcgggcgatgcggttatcgtgacgcttggcgaa
caccactggcaaaccaacgtgaccaatgcgggaagctggagcgtgcagctggatgccgcc
gaggcgcataccctggcgtcgggcgactatgcgcttaccgccagtattcaggatgccgca
ggcaatatcgggcacgcggcgctaaacgttgcgctctataacgaggtagcacagccgcag
ttggccgtcgcgccgaacgacgtgttggcggcggccaccgatgagaagccgatcgaggta
gcggatcacagcgcggtggaaaatccgggcgttaatccggatgtgctcagcgcggcgggc
ctgggaagtcacgacgccttctcgctgctgtttttgcacacgctcaccagcccggacggc
agtgccgatcatgacatgctgcggatgacgggctcacacgaggtgctggatttcgccacg
ctgggcctgaaaatcagcggcgttgaggcgatcgatttgggaagcgcgggcagcaacagc
gtgacgctggggcagaaggatctgttgcagctttccgataacgccagcgactcgctgacc
attaaaggtgcagagggcaatgcggtcacgttgagtacgaaagagggcggcgtctggcag
gaggatggccagcggctggttgacggccagcagtacgatctctatcacaccacggctgtc
ggccacgaaggctctctggcggatgtgctgatccagcataatttgcaggttcaaatcgtc
tga
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