Sinorhizobium garamanticum: PZN02_000089
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Entry
PZN02_000089 CDS
T09001
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
egi
Sinorhizobium garamanticum
Pathway
egi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
egi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PZN02_000089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egi03400
]
PZN02_000089
Enzymes [BR:
egi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PZN02_000089
DNA repair and recombination proteins [BR:
egi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PZN02_000089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WEX87671
LinkDB
All DBs
Position
1:91589..92473
Genome browser
AA seq
294 aa
AA seq
DB search
MIPANHLSRAELAALLAFHADAGVEWLLEDEAVDRFAEFEAMKAKRAEARSAPQSGPTGT
GQRQGARAEPAAPTPSRNAGPAAPAASPPPVAIPDEQAVKEARFAAETARSLQELRTAME
SFNHCNLKNSARNLVFCEGDPSSGIMIVGPMPYADDDRDGQPFAGRLGEMLERMLLGIGL
ARQDVLLTNVVPWRPPGNRVPSGREADICRPFIERQIALAEPKQLLLLGNFTARFFFGGA
DTIHQLRGEWRELSAGGHRVPALATLHPQDLVTAPINKRFAWQDLLVFKAKING
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgatcccggccaaccatctttcccgtgcagagcttgccgcgcttctcgccttccatgcg
gatgcgggcgtcgaatggctgttggaagacgaagccgtcgaccggttcgcagagttcgag
gcgatgaaggcgaagcgcgcggaggcgcgcagcgccccgcaaagcgggccaacaggcacc
ggccagaggcaaggtgcgcgagcagagccggcggcacccaccccgtcgcgcaatgccggt
cctgcagcgccggctgcctctcctccgcctgtcgcgattcccgacgagcaggccgtcaaa
gaggcccgattcgccgcggaaacagcgcgctcgttgcaggaactcagaacggcaatggaa
tccttcaaccattgcaacctgaagaacagcgcgcgcaatctcgtgttctgcgagggcgac
ccctcttccgggatcatgatcgtcgggccgatgccctatgccgacgacgatcgcgatggc
cagccgtttgctggccgactcggtgaaatgctcgaacgcatgcttctcggcatcggcctt
gccaggcaggacgtgctgctgaccaatgtcgtaccctggcgcccgccgggaaatcgcgtg
ccttccggccgcgaggcggatatctgccgccccttcatcgagcggcagatcgcgctggcc
gagcctaagcaattactgcttctcgggaacttcacggcccgcttcttcttcggcggtgcc
gatacgatccatcagttgcggggggaatggcgcgagctttccgcaggcggccatcgcgtt
ccggcgctggcaacgctgcatccacaggatctcgtgaccgcgccaatcaacaagcgtttt
gcatggcaggatctgctggtcttcaaggcgaagatcaacggctaa
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