Sinorhizobium garamanticum: PZN02_000513
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Entry
PZN02_000513 CDS
T09001
Name
(GenBank) PAS domain S-box protein
Organism
egi
Sinorhizobium garamanticum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
PAS_9
HisKA
PAS
PAS_8
PAS_4
PAS_7
Diguanyl_cycl_sensor
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
WEX88059
LinkDB
All DBs
Position
1:516229..519654
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AA seq
1141 aa
AA seq
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MPERQYPFIDIAVHARVRDHFAKGDASVLFSRDLGRVLWANDQGASLFGSASVYDFIDAA
LDPNDLSLRQLRTAATQLSAVGDRRQLLVRISSGFRRLPLNASVELIRIRPGEDAVLFTT
PHNGKALTTEERAARMIAGLDGPDTHMAVLDGDGAILAQSSGFDELGLSEDVRRTLVSDV
ARDRDRLIKRPVLTSKGELPAAVGKISDLPALHLLFAVEAVFEDLDSEAASEGTDDDLPS
SVESVDQPAADELPAMEDQPRQEVPDTASSLADAEQDATAGAGLDDQGELTLAPETTSAP
AEPAIPDEPTSAIEPAAGTAGQSDTDETDGRGFAFTPGGRAVRFVWKIDAEGRFSEISEE
FASAVGPNAADVIGETFADLAQRYDLDPDNRINELLRRRDTWSGKTILWPVEGTSLKVPV
DLAALPTYSRSREFDGFRGFGIVRVADAVIDEKASGMELGRTTEPRQGSAAPPPKSEDEA
TAQEERTETGAEPDVAPADQSPGRDGEWVDFDTAATEPAEPEDPFHGERPALRVAETSER
ASSDKIVELDLRRPGTAGTLTRGEQAAFREIARQLGEHFVTPPESEDIEEPASASTPTKE
APSSAVSDAEAADETKTTVEQGKGAPSADDEAPSTSRTPVGMSSEILDRLPVGLLVHYGD
ELLHANPEFLQLTGYDDLESLSREGGLDALFAHADDIADKQPNEQPNEQPDGTMTLIRRN
GQLTSVNAHLHSIRWEGKSALMLALAPVSGSEDAQTTRDSDAAASEASRLRMEIDELRSI
LETATDGVVILGQEGDVRTMNGSASALFNYDEDEIRGKPFAALFAHESQRAVLDYLQGLS
GHGVASVLNDGREVIGREANGGFIPLFMTIGRLSSSNGYCAVIRDITQWKRTEEELRNAK
RAAETANAHKTEFLARVSHEIRTPLNAIIGFSDMMASEHFGPVGHPRYIEYAGDIGRSGR
HVLDIVNDLLDISKIEAGEMDLDFSAVDINDAVSEAVSLVQPQANSQRVIIRTSLSGSVP
TVVADGRSIKQIALNILANAIRFTPSGGQIVVSTSYEANGSVILRIRDTGIGMTRSELDQ
AMKPFRQVTTGGRKRGDGTGLGLPLTKAMTEANRAQFSINSTPNEGTLVEISFPSQRVLA
N
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagagacagtatcctttcatcgacattgccgtgcatgcacgggtgcgcgatcat
ttcgccaaaggggatgcgtccgtcctgttttcgagggatctcggccgcgtattgtgggcc
aatgaccagggcgcgagcctgttcggcagcgcatccgtctacgatttcatcgatgccgct
ctcgatccgaacgatctctcgcttcgtcagttgcgtacagcagcaacgcagctctcagcc
gtcggcgaccgccggcaactgctggttcggatatcctccggcttccggcgcttgcccttg
aatgcttccgtggaactcatccgcatccgcccgggtgaggacgcggtactcttcaccacc
cctcataacgggaaggcactgacaaccgaggagcgggccgcccgcatgatcgcagggctc
gacggaccggacacgcatatggccgtgctcgacggcgacggcgcgatccttgcgcagtct
tccgggttcgatgaactgggtctgtccgaggacgttcgccgcacactcgtctcggatgtc
gcgcgcgacagggatcggctgatcaagcgcccggtcctgaccagcaagggcgaactcccg
gccgccgtcggcaagatatccgaccttccggccttgcaccttctgttcgccgtggaagcc
gtctttgaggatctcgattccgaagcggcatcggaaggaacagacgacgatctaccctcg
tcggtagaaagtgtcgaccaacctgccgccgacgaactgccggcgatggaggatcagcct
cgccaggaagtcccggacaccgcgtcatcgctggcggatgcggagcaagatgcgaccgcc
ggtgcgggcctggacgatcaaggtgaattgacccttgcgcccgaaacgacatcggcgccc
gcggagcctgccattcccgatgagccgacctcagcaatcgagccagccgcgggaaccgca
gggcaaagcgataccgacgagaccgatggccgcggctttgccttcacgcccggcggtcgc
gccgtccgcttcgtgtggaaaatagacgcagagggacgtttcagcgagatctcggaggag
tttgcctcggccgtaggccccaacgctgctgacgtaatcggcgagacatttgccgatctc
gctcagcgctatgatctcgaccccgacaatcggatcaacgagctcctgcgccggcgcgac
acctggtcgggcaaaacgattctttggccggtcgagggaacgagcctgaaggtacccgtc
gacctcgccgcgcttcccacctattcgcggtcccgagaattcgacggcttccgcggcttc
ggcatcgtccgggtcgcagacgcggtcatcgacgagaaggccagcggaatggaactcggt
cgcaccaccgagcctcggcagggttcggctgccccgcccccgaagagcgaggacgaggcc
accgctcaagaagagcggacggagaccggagcagaacccgacgtcgcgcccgccgaccag
tcgcccggtcgcgatggggaatgggtggactttgacaccgcggcaacggagccggccgag
ccagaagatcccttccacggcgagcgtccggcactgcgcgtcgccgagacatccgagcgc
gcatcgtccgacaagatcgtggaactcgatctgcgcaggccggggacggccgggacgctg
acgcgaggcgaacaagccgcctttcgcgaaattgcgagacaactcggtgaacatttcgta
acacccccggagagcgaggacatcgaggaaccggcctccgcatccacgcctacaaaggag
gcgccctcgagcgccgtatccgacgccgaagccgcggacgaaacgaaaacaaccgtcgag
cagggtaaaggggcgccttcagccgacgatgaagcaccttcgacctcgcgcacgcccgtc
ggcatgagcagcgagatcctcgaccgcctgcctgtcggccttctcgtccactatggcgac
gagctgctgcatgccaatccggaattcctgcaactgacgggatatgacgacctcgaaagc
ctgtcgcgggaaggcggcctcgacgcgctcttcgcccacgccgacgatatcgccgacaag
cagccgaacgagcagccgaacgagcagccggacggaacgatgacgctgatccgccggaac
ggccagcttacatcggtgaacgctcatcttcattcgatccgatgggagggcaaaagcgcg
ctcatgctcgcactggcaccggtgagcggaagcgaagacgcacaaacaacgcgtgacagc
gatgcggcggcaagcgaagcaagccgcctgcggatggaaatcgacgaacttcgctccatt
ctggagacggcgaccgacggagtcgtcatcctcgggcaggaaggcgacgtgcgcacgatg
aacggctcggcaagtgcactcttcaattacgacgaagacgagatccgcgggaagcccttc
gccgcactcttcgcccatgagagccagagggcggtgctcgactatctgcagggtctctcc
ggccatggcgtggcaagcgtgctcaatgacggccgcgaagtgatcggccgcgaggcgaac
ggaggcttcatcccgttgttcatgaccatcgggcggctttcgtcgtccaacggctactgt
gccgtcatccgcgacatcacgcagtggaagcggaccgaggaggaactgcgcaatgcaaag
cgcgccgcggaaactgccaacgcgcacaagaccgaattcctggcgagggtgagccacgag
atccgcacgccgctgaacgccatcatcggtttttccgacatgatggcgagcgagcatttc
ggcccggtcgggcatccccgttacatcgaatatgccggggatatcggccgctccggcagg
cacgtcctcgacatcgtcaacgatctgctcgacatctcgaagatcgaagccggcgagatg
gacctcgatttcagtgccgtcgacatcaacgatgcggtgtctgaagccgtgtcgctggtg
cagccacaggccaacagccagcgcgtgatcatccgcacttcgctctcgggatccgttccg
acggtcgtcgcggacggccgatccatcaagcagattgcgctcaatattctggcgaacgcc
atccgctttaccccgtccggcggccagatcgtcgtgtcgacgtcctacgaggcgaacgga
agcgtcatcctgcggatccgcgacaccgggatcggcatgacgcgcagcgagctcgaccag
gcgatgaaacccttccgtcaggtaaccaccggcgggcgcaagcgcggcgacggtaccggc
ctcggcctgccgctgaccaaggcaatgaccgaggcgaaccgcgcgcagttctcgatcaat
tccacgccgaacgaaggcacgctcgtcgaaatttccttcccatcgcaacgcgtcttggcg
aactga
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