Sinorhizobium garamanticum: PZN02_000955
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Entry
PZN02_000955 CDS
T09001
Symbol
sigJ
Name
(GenBank) RNA polymerase sigma factor SigJ
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
egi
Sinorhizobium garamanticum
Brite
KEGG Orthology (KO) [BR:
egi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egi03021
]
PZN02_000955 (sigJ)
Transcription machinery [BR:
egi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PZN02_000955 (sigJ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
SnoaL_2
LKAAEAR
Sigma70_r4
HTH_23
DUF937
Motif
Other DBs
NCBI-ProteinID:
WEX88472
LinkDB
All DBs
Position
1:989589..990479
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AA seq
296 aa
AA seq
DB search
MVRNDKSGMFEEARPRLLGLAYRILGSRADAEDAVQDTFLKWQAADLSAIESPAAWLTTA
CTRRCLDLLKSAHRKRVDYVGAWLPEPIHTASDDNVEEKLALTSSLTTAFLLMLERLTPK
ERAAYLLHEIFGQPYDEIAETLGMQETAARKLVSRAKSNIGVVQTRHATPRERQDELLGA
FRDAIHGGDIAGLSALLSADVKLTADGGGKAATVLGILSGKETVMAFIAERLTEYWSHYR
WETAELNGGRGIVLRGDGDDVAATVSFGYDHDGRVADIFIVRNPDKLTHLDDATVH
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggttcgcaacgacaagagcggcatgttcgaggaggcgcggccgcgcctcctcggcctc
gcctaccgcattctgggttcgcgtgccgatgccgaggatgcggtgcaggacacgtttctt
aaatggcaggcggccgatctttccgcgatcgaaagtccggccgcctggctcaccaccgcc
tgcacccgccgctgcctcgatctgctcaaatccgcccaccgcaaacgcgtcgactatgtc
ggcgcgtggctgccggaaccgatccacaccgcaagcgacgacaacgtggaggagaagctt
gcgctcacctcctcgctcacgaccgcattcctgctgatgctcgaacggctgacgcccaag
gagcgggctgcctatctgttgcatgagattttcggccaaccctatgacgagattgccgaa
acgctcggcatgcaggagacagccgcccgcaaactggtctcacgcgcgaaatccaatatc
ggtgtggtccagacccgacatgcgacaccgcgcgaacggcaggacgaactcctcggcgcc
ttccgcgacgccattcacggcggcgacatcgccggtctttcggcgctgctctcggccgac
gtgaagctcaccgccgacggaggcggcaaagccgcgaccgtgctcggcatcctttccggc
aaggagaccgtcatggccttcatcgccgagcgcctgaccgaatactggtcgcactaccgg
tgggaaaccgcggagctcaacggcggacgcggcatcgtccttaggggcgatggcgacgat
gtcgccgcgacggtttccttcggctacgaccacgacggccgggtcgccgacatcttcatc
gtccgcaatccggacaagctcactcatcttgacgacgcaaccgttcattga
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