Sinorhizobium garamanticum: PZN02_001005
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Entry
PZN02_001005 CDS
T09001
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
egi
Sinorhizobium garamanticum
Pathway
egi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PZN02_001005 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egi03019
]
PZN02_001005 (pnp)
03016 Transfer RNA biogenesis [BR:
egi03016
]
PZN02_001005 (pnp)
Enzymes [BR:
egi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PZN02_001005 (pnp)
Messenger RNA biogenesis [BR:
egi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PZN02_001005 (pnp)
Transfer RNA biogenesis [BR:
egi03016
]
Prokaryotic type
tRNA degradation factors
PZN02_001005 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
WEX88517
UniProt:
A0ABY8DFP4
LinkDB
All DBs
Position
1:complement(1038661..1040814)
Genome browser
AA seq
717 aa
AA seq
DB search
MFETHKVEIEWAGRPLKLETGKIARQADGAVLATYGETVVLATVVSAKAPKPGQDFFPLT
VNYQEKTYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFPEGYKNDTQVIVTVMQH
DLENNPDIVSMVAASAALTLSGIPFMGPIGGARVGYINGQYVLNPHLDEMDESSLDLVVA
GTQEAVLMVESEAKELPEDIMLGAVVFGQKGFQPVIDAIIKLAEVAAKEPREFEPEDHSA
LENAMLSIAEDELRNAYKITEKAARYAAVDAVKAKVKEHFLPEGLENPPHTAEEIAAVFK
HLQAKIVRWNILDTQSRIDGRDLVTVRPIVAEVGILPRTHGSSLFTRGETQAIVVATLGT
GEDEQYVDSLTGMYKENFMLHYNFPPFSVGETGRMGSPGRREIGHGKLAWRAIHPMLPTA
EQFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLIKEDDRFAVL
SDILGDEDHLGDMDFKVAGTDAGITSLQMDIKIEGITEEIMGVALNQARGGRLHILGEMA
KAISESRGQLGEFAPRIEVMNIPVDKIREVIGSGGKVIREIVEKTGAKINIEDDGTVKIA
SASAKEIEAARKWIHSIVAEPEVGQIYEGTVVKTADFGAFVNFFGARDGLVHISQLASER
VAKTTDVVKEGDKVWVKLMGFDERGKVRLSMKVVDQATGKEVVAEKAEKKDGGEAAE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagacccacaaggtagaaatcgaatgggcagggcgtccgctcaagctcgaaacc
ggcaagatcgcgcgtcaggctgacggtgccgttctcgccacctacggcgaaacggtggtg
cttgccaccgttgtttccgccaaggcaccgaagccgggccaggatttcttcccgctcacc
gtcaactaccaggaaaagacctacgcggccggcaagattcccggcggttatttcaagcgc
gaaggccgcccgagcgaaaacgaaacgctcgtttcccgcctgatcgaccggccgatccgc
ccgctctttccggaaggctacaagaacgacacccaggtgatcgtcacggtcatgcagcat
gacctggagaacaatccggacatcgtttcgatggttgcggcctctgccgcgctgacgctt
tccggcatcccgttcatgggcccgatcggcggcgcccgcgtcggttacatcaacggccaa
tatgtgctgaacccgcatctcgacgagatggacgaatcctctctcgatctcgtcgtcgcc
ggcacgcaggaagccgtgctgatggtcgagtcggaagccaaggagctgccggaagacatc
atgctcggcgccgttgtcttcggccagaagggcttccagccggtgatcgatgcgatcatc
aagctcgccgaagtcgccgctaaggagccgcgcgagttcgagccggaagatcattccgcc
ctcgaaaacgccatgctgtcgatcgcggaagacgagctgcgcaatgcctacaagatcacc
gagaaggcagcccgctacgccgctgtcgacgccgtcaaggccaaggtgaaggaacacttc
ctgccggaaggcctcgagaaccctccccacacggccgaagagatcgctgccgtcttcaag
cacctgcaggccaagatcgttcgctggaacatcctcgacacccagagccgcatcgacggc
cgcgacctcgtcacggtccgcccgatcgtcgccgaagtcggcatcctgccgcgcacgcac
ggttcctcgctcttcacccgcggcgagacgcaggcgatcgtggttgccacgcttggcacg
ggcgaagacgagcagtatgtcgattccttgaccggcatgtacaaggaaaacttcatgctg
cactacaacttcccgcccttctcggtcggtgaaacgggtcgtatgggttctccgggtcgt
cgcgaaatcggtcacggcaagctcgcttggcgcgccatccacccgatgctgccgacggcg
gaacagttcccctacacgctgcgcgtcgtctccgaaatcaccgagtccaacggctcctcc
tcgatggccaccgtctgcggtacctcgctggcgctgatggatgcaggcgttccgcttgcc
aagcccgtcgccggtatcgccatgggcctcatcaaggaagatgaccgcttcgccgttctc
tccgacatcctcggcgacgaagaccatctcggcgacatggacttcaaggttgcgggcacg
gatgccggtatcacctcgctgcagatggacatcaagattgaaggcatcaccgaagagatc
atgggtgttgccctcaaccaggccaggggcggccgcctgcacattctcggcgaaatggcc
aaggccatctccgagagccgcggccagctcggcgaattcgccccgcgcatcgaagtgatg
aacatcccggtcgacaagatccgtgaagtcatcggttcgggcggcaaggtcatccgcgag
atcgtcgaaaagaccggcgccaagatcaacatcgaagacgacggcacggtcaagattgca
tccgcctccgccaaggagatcgaagcggcccgcaagtggatccactcgatcgtcgctgag
ccggaagtcggccagatctacgaaggcacggtcgtcaagaccgccgatttcggcgccttc
gtcaacttcttcggcgcccgcgatggcctcgtccacatctcgcagctcgcctccgagcgt
gtcgccaagacgaccgatgtcgtcaaggaaggcgacaaggtctgggtcaagctgatgggc
ttcgacgagcgcggcaaggttcgcctctccatgaaggtcgtcgatcaggcgaccggcaag
gaagtcgtcgccgagaaggcggagaagaaggacggtggcgaagcggctgaataa
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