Sinorhizobium garamanticum: PZN02_001008
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Entry
PZN02_001008 CDS
T09001
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
egi
Sinorhizobium garamanticum
Brite
KEGG Orthology (KO) [BR:
egi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
egi03016
]
PZN02_001008 (truB)
Enzymes [BR:
egi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PZN02_001008 (truB)
Transfer RNA biogenesis [BR:
egi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PZN02_001008 (truB)
Prokaryotic type
PZN02_001008 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
WEX88520
UniProt:
A0ABY8DCB0
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All DBs
Position
1:complement(1043867..1044802)
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AA seq
311 aa
AA seq
DB search
MSKPRKPKGRPISGWLILDKPLDFGSTEAVSKIKWLFKAQKAGHAGTLDPLASGMLPIAL
GDATKTVPYVMDGRKIYEFTVAWGEERTTDDLEGEVVRSSAERPKEEAIRALLPKYTGVI
SQVPPQFSAIKIDGERAYDLAREGETVEIPAREVEVFRLSLIGCTPHLAHFEIECGKGTY
VRSLARDMGRDLGCFGHIASLRRTFVAPFGEDDMVPLADLVALEKIEDDGERLAALDDFL
IETGEALSDLPHIAVNDDQAHRLKMGNPIILRGREAPLPAPEAYATARGKLVAIGEIAEG
EFRPKRVFATP
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccgcgcaaacccaagggtcgcccgatctcgggctggctgatcctcgacaag
ccgctcgatttcggttccaccgaggccgtttccaagatcaagtggctgttcaaggcgcag
aaggcgggtcacgccggcacgctcgatccgctcgcctccggcatgctgccgatagcgctt
ggtgacgcgacgaagaccgtcccctacgtgatggatgggcgcaagatctacgagttcacc
gtcgcctggggcgaggagcggacgaccgacgatcttgagggcgaagtcgtccgctcgtcc
gcagagcggccgaaggaagaggcgatccgcgccctgctgccgaaatataccggtgtgatt
agccaggtgccgccgcaattctcggcgatcaagattgacggcgaacgcgcctacgatctc
gctcgcgagggggagacggtagaaattccggcccgggaagtggaggtttttcggctttcg
ctgatcggatgcacgccgcatctcgcgcatttcgagatcgagtgcggcaagggaacctat
gttcgctcgcttgcccgcgatatgggccgcgatctcggctgcttcgggcatatcgcttcg
ctccgccgcactttcgtggctcccttcggcgaagatgacatggtgccgcttgccgacctc
gtcgcgctggagaagatcgaggacgatggcgagcggcttgccgcgctggacgacttcctg
atcgagacgggcgaggctctttccgacctgccgcacatcgccgtcaacgatgatcaggcg
catcgcctcaagatgggcaatccgatcatcctgcgtggccgcgaggcaccgctgcctgct
cccgaggcctatgcaacggcgcgcggcaagctcgtggcgatcggcgagatcgccgaaggc
gaattccggccgaagcgggtgtttgccacgccgtga
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