Sinorhizobium garamanticum: PZN02_001214
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Entry
PZN02_001214 CDS
T09001
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
egi
Sinorhizobium garamanticum
Brite
KEGG Orthology (KO) [BR:
egi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egi03400
]
PZN02_001214 (addB)
Enzymes [BR:
egi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PZN02_001214 (addB)
DNA repair and recombination proteins [BR:
egi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
PZN02_001214 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
DUF7280
Motif
Other DBs
NCBI-ProteinID:
WEX88704
LinkDB
All DBs
Position
1:1278740..1281916
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AA seq
1058 aa
AA seq
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MPGHASNVFTIPAGLPFLRTLAQKLCDGGLVPGFKYDPADPLMLAGVTIFVPTRRSARVL
RSEFVDLLGGRSAILPTIRALGETDDDSGFFDAEVPAILDLAPPLSGTARLIELGRLILA
WRNQLPQAVLDIHGESPLIAPASPADAIWLARNLADLIDAVETEELDWEALDGLDAGEHA
LWWQLTLAFLKIARTYWPERLDELKQSSPSRHRNAILQAETQRIAAGKVSGPIIIAGSTG
SIPVTAALIAAVSRLPNGTIVLPGLDQTMSDTEWELIVGDASSGVTRDPASRSHPQYGFY
RLLKRMGLGRRDVQTLEPADSSLDYRSMVLSRALLPAKATDSWTRARGDFDQARLLSAFA
DVALIETANEREEATAIAIALRLALADSDESQAALITPDRGLARRVGAELARFGIEADDS
AGTPLAATAAGAVVRLLLEAALRPGDPVPLVALLKHPLVRFGETTESVRRAADALELLAL
RGGTSNADISALVTLVDQALEKRKHDRHPPPWQSRLNEEDTAAARNLAERVALAAEPLAS
ASVLHTDGQPRTKVLTLADWAERTGRALEAVCVDERGSLGDLWSTEAGEALATLLKGIIE
TEGQMTADGPQWCDIVEALAASEAVKPRSMRHPRVFIFGALESRLQSMDLVVLGGMNEGT
WPGQTSNDPFLSRTMKSGIGLEPPERRIGQLAHDFQMACGTRRLILSRSMRQGSAPTVAS
RWLQRLQALGGERLTQLIKSNGADYLHWARILDEGETQPLATRPEPKPPAELQPRKYSFS
EVTRLRRDPYAVYARRILRLQPIDPFNRDPGAAERGTLYHRIVDRFVRGGFDPASPEAEA
VMTRLLNEAFDEEGLPPHIDTIWRPRFAAVGRAFLKWERERRKSITKSFTEVPASMDIGL
ADIRLTGIADRLDRRPDGTIDIIDYKTGSSPSPKEARSLLDPQLSLEAAALKAGAFGATG
RAEPNALLYVRLKPGTRFSVDAVNNEGGKSKETKSADQLAEESLVELRKLLAALMSGRHG
FASRLIVQKERDYGGEYDHLARVAEWATAEGEDDADEG
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
gtgcccggccacgcctcgaacgtcttcacgatccccgccggcctgccgttcctcagaacg
ttggcgcaaaagctctgcgacggcgggctggttccgggtttcaagtacgatcccgcggat
ccgctgatgctcgccggtgtgacgatcttcgttcctacgcgacggtccgcgcgtgtgctt
cgctcggagttcgtcgatctgctcggcggccgctcggccatcctgccgacgatccgcgct
ctcggcgagacggacgacgacagtggctttttcgacgccgaggtgcccgcgatcctcgat
cttgccccgcctctttccggcaccgcgcgcctgatcgagctcggtcgcctcatcctcgcc
tggcgcaaccagctgcctcaggcggttctcgatatccatggcgaaagtccgctgatcgcg
ccggcgagccccgccgatgccatctggctcgcgcgcaatctcgccgatctgatcgacgcc
gtggaaaccgaggaactcgactgggaggcgctcgatggactcgacgccggcgaacatgcg
ctctggtggcaattgacgcttgccttcctcaagatcgcccgcacctactggccggagcgg
ctggacgagctgaagcagtcctcgccttcccgccaccgcaacgccattctgcaggcggag
acacagcgtatcgccgcaggaaaggtgagcgggccgatcatcatcgccggttcgaccggt
tcgatcccggtgacggccgcgctgatcgcagccgtgagcaggctgccgaacggcaccatc
gttctgccggggctcgatcagacgatgagcgatacggaatgggagctgatcgtcggcgat
gcttcgagcggcgtcacgagagatccggcaagccgcagccacccgcaatacggcttctac
cgcctgctgaaacgcatgggcctcggtcggcgcgatgtccagacgcttgagccggccgat
agttcgctcgactatcgcagcatggttctctcgcgcgccctgcttccggcaaaggcgact
gacagctggacccgggcgcgtggagatttcgatcaggcaaggctcctctcggccttcgcg
gacgtcgcgctgatcgagacggccaatgagcgggaagaggcaacggccatcgccatcgcg
ctccggctcgcgcttgccgacagcgatgaaagtcaggcggccttgatcaccccggatcgc
ggcctggcgcgccgcgtcggggcggagcttgcccgcttcggcatcgaggccgacgattcc
gccggcacgccgctcgccgccacagccgccggcgccgtcgtccgtttgttgctggaggcg
gcgttgcggccgggcgatcccgtgccactggtcgctcttctgaagcacccgctcgtccgc
ttcggcgagacaaccgagtctgtccggcgcgccgccgatgcgctggaactcctggcgttg
cgcggcggtacgagcaatgccgacatttcggcgcttgtcaccctcgtcgatcaggcgctc
gaaaagcgaaagcacgaccgtcatccgcccccgtggcagagtcgcctcaacgaggaggat
acagccgccgcgcggaatcttgccgaacgcgttgcgttggccgccgaacccttggcgagc
gcgtccgtgcttcacacggacggccagcctcggaccaaggtgctcacccttgccgactgg
gcggagcgaacgggccgcgcattggaggccgtttgcgtcgacgagcgcggcagccttggt
gacctctggtccacggaagctggcgaagcattggcaacgcttctcaagggcatcatcgag
acggaaggccagatgaccgccgacgggccgcaatggtgcgacatcgtcgaagcgctcgcg
gcaagcgaggcggtcaagccccgttcgatgcggcatccccgcgtattcatcttcggggcg
ctggaatcgcgcctgcaaagcatggacctcgttgtgctcggcggcatgaacgagggcaca
tggccgggacagacgtcaaacgaccccttcctgtcgcggacaatgaaatccggaatcggc
ctcgagccgcccgaacggcgtatcggccagctcgcgcacgatttccagatggcctgcggc
acgcgccggctgattctgtcgcgctccatgcgccaaggttcggcaccaactgtcgcgtca
aggtggctgcagcgcctgcaggcactcggcggcgaaagactgacgcaactcatcaagtcc
aacggtgcggactatctgcactgggcgcgcattctcgatgaaggcgaaacccagccgctc
gccacgcgaccggaaccaaagccgcccgccgaactgcagccacgcaaatattccttcagc
gaagtgactcgccttcgtcgtgatccctatgccgtctacgcgcggcggatcctgcggctg
cagccgatcgaccccttcaatcgtgatccgggggccgccgagcgtggaacgctctaccat
cgaatcgtcgatcgcttcgtcaggggcggtttcgatccagcctcgcccgaagcggaagcg
gtgatgaccaggttgctcaacgaggctttcgacgaggaagggcttcccccgcatatcgac
acgatctggcgcccacgttttgccgccgtcggaagggcgttccttaaatgggagcgcgaa
cgccggaagagcatcacgaaatctttcaccgaggttccggcatccatggatatcggcctt
gcggatatccggctgaccggcatcgccgatcgccttgatcggcgcccggacggcaccatc
gacatcatcgactacaaaaccggctccagcccctcgcctaaggaagcgcgcagtctgctc
gatccgcagctttcgctcgaggccgccgcactcaaggccggcgccttcggcgcgacggga
cgcgccgagccgaatgcgcttctctacgtccgcctgaaacccggcacccgcttcagcgtc
gatgccgtcaacaacgagggtggcaaatcgaaggagacaaaatccgcagaccaactggcg
gaagaatcgcttgtcgagctgaggaagctgctcgcggcgctgatgagcggcaggcacggt
ttcgcctcgcgcctgatcgtccagaaggagcgcgactacgggggcgaatatgatcatctg
gcgcgggtcgccgaatgggcgaccgccgaaggcgaggatgatgccgatgagggatga
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