Sinorhizobium garamanticum: PZN02_001310
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Entry
PZN02_001310 CDS
T09001
Name
(GenBank) autoinducer binding domain-containing protein
KO
K07782
LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
Organism
egi
Sinorhizobium garamanticum
Pathway
egi02020
Two-component system
egi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
egi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PZN02_001310
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PZN02_001310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
egi03000
]
PZN02_001310
Transcription factors [BR:
egi03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
PZN02_001310
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
HTH_23
Motif
Other DBs
NCBI-ProteinID:
WEX88798
LinkDB
All DBs
Position
1:1407387..1408127
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AA seq
246 aa
AA seq
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MNITLLVQFLALLEEMKTREEILPEFERLLDRCGFDFYGVVRQPKPNENPLRLLLAGRWP
DGWPQIYIRKKYVVIDPTIRYLGHAQRGFRWRDTLAAFRSDPHRKRMESMMVEARNHGLF
DGYIFPVHGRRGLMGNLTVGGRVVDLSPVELSLFDAIAKRLFWKLLELTDPEIMAELISR
VEVQMTRREMEALNYLADGMTSNDIGKVLDISSHTVDWYMNGIQEKLKAKNRHHVVAIAF
RLGLIS
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcacgttgctcgtacagtttctggcgctcctggaggagatgaagacgcgcgag
gagatactgcccgagtttgaacggctgctcgatcgttgcggtttcgacttctacggtgtc
gtgcgccagccgaagcccaatgagaaccctctgaggctgctccttgccggccgctggccg
gacggctggccgcaaatctacatccgcaaaaaatatgtcgtcatcgatccgacgatccgc
tatctcggccatgcccagcgcggattccgctggcgcgacacgcttgcggccttccgctcg
gatccacatcgcaagcgcatggaaagcatgatggtcgaggcgcgcaatcacggcctcttc
gacggttatattttcccggtgcacggccggcgcgggctgatgggcaacctcactgtcggt
ggccgcgtggtggacctcagcccggtcgaattgagcctcttcgacgcgatcgccaagagg
ctcttctggaagctgctggagctcaccgatccggagatcatggccgagctcatctcgcgc
gtcgaagtgcagatgacgcggcgtgaaatggaggcgctgaactaccttgccgacggcatg
acatcgaacgacatcggcaaggtcctcgacatatcgagccacacggtcgactggtacatg
aacggcattcaggaaaagctgaaggcgaagaaccgccatcacgtcgtcgccatcgccttc
cgtcttggccttatttcctga
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