Sinorhizobium garamanticum: PZN02_001469
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Entry
PZN02_001469 CDS
T09001
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
egi
Sinorhizobium garamanticum
Pathway
egi00020
Citrate cycle (TCA cycle)
egi00190
Oxidative phosphorylation
egi00650
Butanoate metabolism
egi00720
Other carbon fixation pathways
egi01100
Metabolic pathways
egi01110
Biosynthesis of secondary metabolites
egi01120
Microbial metabolism in diverse environments
egi01200
Carbon metabolism
Module
egi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
egi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
egi_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
egi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PZN02_001469 (sdhA)
00650 Butanoate metabolism
PZN02_001469 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
PZN02_001469 (sdhA)
00720 Other carbon fixation pathways
PZN02_001469 (sdhA)
Enzymes [BR:
egi01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
PZN02_001469 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
Pyr_redox_2
FAD_oxidored
Thi4
FAD_binding_3
HI0933_like
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
WEX88941
LinkDB
All DBs
Position
1:1576034..1577875
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AA seq
613 aa
AA seq
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MASISSPAANGRAYQYVDHAFDVVVVGAGGAGLRATLGMAEQGLKTACITKVFPTRSHTV
AAQGGIAASLQNMTPDSWQWHLYDTVKGSDWLGDVDAMQYLTMEAPKAVYELEHYGVPFS
RNEEGKIYQRPFGGHMQNYGEGPPVQRTCAVADRTGHAILHTLYGQSLRNNAEFFIEYFA
IDLIMSDDGRCTGVVAWNLDDGTIHRFSAKMVVLATGGYGRAYFSATSAHTCTGDGGGMI
ARAGLPLQDMEFVQFHPTGIYGSGCLITEGARGEGGYLVNSEGERFMERYAPSAKDLASR
DVVSRCMTLEIREGRGVGKNKDHIFLHLDHLDPTVLHERLPGISESAKIFAGVDVTREPI
PVLPTVHYNMGGIPTNYWGEVLNADSENPERLAPGLMAVGEAGCASVHGANRLGSNSLID
LVVFGRAAAIRAGQIIDRQESIPALNTAACDRIVERFDRLRHANGRTPTAVLREKMQRAM
QDDAAVFRTQESLESGCRRLSEIWKELSDVKVTDRSMIWNSDLVETLELENLMANAITTI
YGAEARKESRGSHAREDYTEGPFGGRDDVNWRKHTLAWVNEAGDVRLDYRPVHTDLIAEG
IDPMKIAPKARVY
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgatcagttcacccgctgcaaacggcagggcttaccaatatgtcgatcacgcc
ttcgacgtcgtcgtcgtcggcgccggcggcgcgggcctccgcgcgaccctcggcatggcc
gagcagggcctgaagacggcctgcatcaccaaggtttttccgacccgctcgcacaccgtc
gcggcccagggcggcatcgccgcgtcgctgcagaacatgacgcccgacagctggcagtgg
catctctacgacacggtcaaggggtccgactggctcggcgacgtcgacgccatgcagtat
ctcaccatggaagcgccgaaggcggtctacgagctcgagcactacggcgtgccgttctcg
cgcaacgaggaaggcaagatctaccagcggcccttcggcggccacatgcagaactacggc
gaaggcccgccggtgcagcgcacctgcgcggttgccgaccgcactggccatgcgatcctg
cacacgctctacggccagtcgctccggaacaacgccgaattcttcatcgaatatttcgcc
atcgacctgatcatgtcggacgacgggcgctgcaccggcgtcgtcgcctggaaccttgat
gacggcacgatccaccgcttttcggcgaagatggtggtgctggcgaccggcggttacggc
cgcgcctatttctcggcgacgtcggcacacacctgcaccggcgacggcggcggcatgatc
gcccgcgccggcctgccgctccaggacatggagttcgtgcagttccacccgaccggcatc
tacggctccggctgtctgatcaccgaaggggcgcgcggcgaaggcggttatctcgtcaat
tcggaaggcgagcgcttcatggagcgttatgccccgtccgccaaggacctcgcctcgcgc
gacgtcgtctcgcgctgcatgacgctcgaaatccgcgaaggccgcggcgtcggcaagaac
aaggaccacatcttcctgcatctcgaccatctcgatccgacggtgctgcacgaacgcctg
ccgggcatttccgagagcgcgaagatctttgccggcgttgacgtcacccgcgagccgatc
ccggttctgccgaccgtccactacaacatgggcggcattcccaccaactattggggcgag
gtgctgaatgccgacagcgagaaccccgagcgcctcgcgcccggcctgatggcggtcggc
gaagcgggctgcgcctcggttcacggcgccaatcgcctcggctccaattcgctgatcgac
ctggtcgtcttcggccgcgctgcggcgatccgtgctggccagatcatcgaccgccaggaa
tccattccggcgctcaacaccgctgcctgcgaccgcatcgtcgagcgtttcgaccgcctg
cggcatgccaatggcaggacgccgacggcggtgctgcgcgagaagatgcagcgcgccatg
caggacgacgccgccgtcttccgcacgcaggaatcgctcgaatccggctgccgtcgcctc
tcggagatctggaaggagctttccgacgtcaaggtcaccgaccgctcgatgatctggaat
tccgaccttgtcgaaacgctggagctggaaaacctgatggccaatgccatcacgactatc
tacggcgccgaagcacgcaaggagagccgcggttcgcatgcgcgcgaggattacaccgaa
ggcccgttcggggggcgcgacgacgtcaactggcgcaagcatacgcttgcctgggtcaac
gaggccggcgatgtccggctcgactaccgcccggttcacaccgacctgatcgccgagggc
atcgatccgatgaagatcgccccgaaggcgcgcgtgtactag
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