Sinorhizobium garamanticum: PZN02_001908
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Entry
PZN02_001908 CDS
T09001
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
egi
Sinorhizobium garamanticum
Pathway
egi00300
Lysine biosynthesis
egi00470
D-Amino acid metabolism
egi01100
Metabolic pathways
egi01110
Biosynthesis of secondary metabolites
egi01120
Microbial metabolism in diverse environments
egi01230
Biosynthesis of amino acids
Module
egi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
egi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PZN02_001908 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PZN02_001908 (lysA)
Enzymes [BR:
egi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PZN02_001908 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF6003
Motif
Other DBs
NCBI-ProteinID:
WEX89339
UniProt:
A0ABY8DEN6
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All DBs
Position
1:complement(2064737..2066005)
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AA seq
422 aa
AA seq
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MNHFQYRDGILYAEDVPVTDIARAVGTPFYCYSTATLERHYRVFAQAFADVDAMVCYAMK
ANSNQAVLKTLARLGAGVDVVSEGELRRALAAGVPANRIMFSGVGKTAHEMDFAIEAGIY
CFNVESEPELEVLNQRALRAGKQAHVSFRINPDVDARTHAKISTGKKENKFGISWERARS
VYAHAATLPGIKVTGIDMHIGSQITELQPFDDAFKLLRELVDTLRSDGHVIDHVDIGGGL
GIPYKEDNNPPPLPDAYADIVKNQLKGLDCRIVTEPGRLIVGNAGILVTEVVYVKDGGDK
TFVIVDSAMNDLIRPTLYEAYHEIRPVRISAANAPRIKADVVGPVCETGDYLALDREMAM
PKPGDLFAIGSAGAYGAVQSGTYNSRLLVPEVLVKGDRFHVVRPRKDYDSLIGLDSVPDW
LD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccatttccaataccgtgacggaattctctacgccgaagacgtccccgtgacggac
atcgcaagagccgttggaacacccttctattgctattccaccgcaacgctggaacgccac
taccgggtcttcgcgcaagccttcgccgacgttgacgccatggtctgctacgccatgaag
gccaattcgaaccaggccgtgctgaagacgctggctcggcttggcgcgggggtcgatgtg
gtttccgagggcgaactccgtcgcgcgcttgccgccggcgtgccggcgaaccggatcatg
ttttccggcgtcggcaagaccgcgcacgagatggatttcgccatcgaggcggggatctat
tgcttcaatgtcgagtccgaaccggagctcgaggtcctgaaccagagggcactaagggcc
ggcaagcaggcgcatgtttccttccgcatcaatccggacgtcgatgcccgcacgcatgcg
aagatttcgaccggcaagaaggagaacaagttcggtatttcctgggagcgggcgcgtagc
gtttatgcccatgcggccaccctgcccggcatcaaggtcaccggcatcgacatgcatatc
ggcagccagatcacggagttgcagccgttcgatgatgccttcaagctgctgcgtgagctc
gtcgataccctcaggtccgatggccatgtgatcgaccacgtcgatatcggcggaggtctc
ggcattccctacaaggaagacaacaatccgccgccattgcccgatgcctatgccgacatc
gtcaagaaccagcttaagggccttgattgccgcatcgtcaccgaacccggccggctgatc
gtcggcaacgccggtattctcgtcaccgaagtggtctacgtaaaagatggcggcgacaag
accttcgtcatcgttgacagcgcgatgaacgacctgatccgcccgacgctctacgaggcc
tatcacgaaatccggccggtgaggatttccgctgccaatgcgccgcgcatcaaggccgac
gtggttggccctgtttgcgaaactggcgactacttggcgctcgatcgcgagatggcgatg
ccgaaaccgggcgatctcttcgcaatcggctcggccggtgcttacggcgccgtgcagtcg
ggtacctacaacagccgcctgctcgtgccggaagtgctcgtcaagggcgaccgcttccac
gtcgtgcgtccgcgtaaggactatgacagtctgatcggcctcgactcggtgccggactgg
cttgactga
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