Sinorhizobium garamanticum: PZN02_002128
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Entry
PZN02_002128 CDS
T09001
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
egi
Sinorhizobium garamanticum
Pathway
egi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
egi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PZN02_002128
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
egi02000
]
PZN02_002128
Transporters [BR:
egi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PZN02_002128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
SMC_N
AAA_21
ABC_ATPase
AAA_23
TOBE
AAA
AAA_28
AAA_25
NACHT
AAA_22
nSTAND3
Zeta_toxin
RsgA_GTPase
AAA_5
Mg_chelatase
ATPase_2
PduV-EutP
AAA_29
AAA_14
Rad17
TsaE
TOBE_3
Motif
Other DBs
NCBI-ProteinID:
WEX85891
LinkDB
All DBs
Position
1:2298103..2299140
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AA seq
345 aa
AA seq
DB search
MSGLALQNVVKEFGSFRAVNNVELTVPHGTFVCMLGPSGCGKTTLLRMIAGLDLPTGGAI
RLDGEDITRVPTHKRNLGMVFQSLALFPHLSVGENIAYPLRIRKAPKEDQKRRVEELLSM
IHLQGYADRPVSKLSGGQRQRVAIARALAISPKLFLLDEPLSALDAKLREAMQVELRQLQ
QKLGITTIVVTHDQREAMTMADTVVVMNGGEICQAASPIEIYRRPADSFVADFIGQTNLI
EAEADSLGHVSVLGQSVPGLSLLPGAAKATLSIRPEDVHLTAPGAGAISGTVTFVRDLGG
TIETFVDVAGRQIVAVSTPRERPDVTVGQEVGVALTPDVCVVLRK
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggacttgcccttcaaaacgtcgtcaaggaattcggctccttcagggccgtcaac
aatgtcgagctcacggtgccgcacggcaccttcgtctgcatgctcggcccgtctggctgc
ggcaagacgacgttgctgcgcatgatcgccgggcttgatctgccgaccggaggtgcgatc
cgcctcgacggcgaagacatcacccgcgtgccgacccataagcgcaatctcggcatggtg
ttccagtcgctggcgctcttcccgcacctgagcgtcggcgaaaacatcgcctatcccttg
cgcatccgaaaggcgccgaaggaggaccagaagcggcgggtcgaggaactgctgtcgatg
atccaccttcagggctatgcggaccggccggtttccaagctttccggcggccagcgccag
cgtgtggcaattgcccgcgcgctggcaatctcgccgaagcttttcctgctcgacgagccg
ctttcggcgctcgacgcgaagcttcgggaagcgatgcaggtggaacttcggcagttgcag
cagaagctcggcatcacaacgatcgtcgtcacgcacgaccagcgcgaagcgatgaccatg
gccgacacggtcgttgtcatgaatggtggcgaaatctgccaggcggcctcgccgattgaa
atctaccgccggccggcggacagtttcgtcgccgacttcatcggccagaccaacctgatt
gaagccgaagcagactcgctcggccatgtttccgtgctcggccagtcggtgccgggtctc
tcgctactccccggcgcggcaaaggcgacactttcaattcgtcccgaggacgtacacctg
acggcaccgggtgccggtgcgatttccggcactgtcaccttcgtgcgtgatcttggcgga
acgatcgaaacctttgtcgatgtcgccggccgccagattgtcgccgtttccacgccgcgc
gagcggccggacgtcaccgtcggccaggaggtcggcgtcgcgctcactccggacgtttgc
gtggtgctcaggaaatga
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