Sinorhizobium garamanticum: PZN02_002242
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Entry
PZN02_002242 CDS
T09001
Symbol
xylF
Name
(GenBank) D-xylose ABC transporter substrate-binding protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
egi
Sinorhizobium garamanticum
Pathway
egi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
egi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PZN02_002242 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
egi02000
]
PZN02_002242 (xylF)
Transporters [BR:
egi02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
PZN02_002242 (xylF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
DHQS
ABC_sub_bind
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WEX85993
LinkDB
All DBs
Position
1:complement(2404758..2405798)
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AA seq
346 aa
AA seq
DB search
MKSVLKLMAGAAIIASMHSAAIAKDLVVGVSWSNFQEERWKTDEAAIKAALEASGDKYIS
ADAQSSAAKQLTDIESLIAQGANALIVLAQDSDAIAPAIEKATAEGIPVVGYDRLIENPA
AFYITFDNKEVGRMQAREVFKAKPEGNFVFIKGSSSDPNADFLFAGQMEVLKEAVDGGKV
KNVGEAYTDGWKPENAQKNMEQFLTANDNKVDAVVASNDGTAGGAIAALSAQGLAGSVPV
SGQDGDFAALNRVALGTQTVSVWKDARELGKKAAEIASALAAGKTMDEIEGVQTFNGGPK
GVAMKSVFLAPLAITKDNLNVVIDAGWISKDAACQGVAAGTTAACN
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccgttttgaagttgatggcgggggctgccatcatcgcgtccatgcattcggcg
gcgatcgccaaggatcttgtcgtcggcgtttcctggtcgaacttccaggaagagcgttgg
aagaccgacgaggctgccatcaaggccgcgcttgaagcttccggcgacaagtatatctca
gccgatgcccagtcttccgccgccaagcagctgaccgacatcgaatcgctgatcgcgcag
ggcgcaaacgccttgatcgtgctcgcccaggattccgacgcgatcgccccggcgatcgaa
aaggccaccgcagagggcattccggtggtcggctacgaccgcctgatcgagaatccggcc
gccttctacatcaccttcgacaacaaggaagtgggccgcatgcaggcccgggaagtcttc
aaggcgaagccggaaggcaacttcgtcttcatcaagggctcctcgtccgacccgaatgcc
gacttcctctttgccggccagatggaagtgctgaaggaagcggttgacggcggcaaggtc
aagaatgtcggcgaggcctacaccgatggctggaagccggaaaatgctcagaagaatatg
gagcagttcctgaccgccaacgacaacaaggtcgacgcggtcgtcgcttcgaacgacggc
acggccggcggcgcgattgccgcgctttcggcacagggcctcgccggctccgttccggta
tccggacaggacggcgactttgcggcgctcaaccgcgtcgcgctcggcacccagaccgtt
tccgtctggaaggacgcgcgcgagctcggcaagaaggccgctgaaatcgcttccgcgctc
gccgccggcaagacgatggacgagatcgagggcgttcaaaccttcaacggcggaccgaag
ggtgttgccatgaagtcggtcttcctggcaccgcttgccatcaccaaggataatctgaac
gtcgtcatcgacgcgggctggatttccaaggacgcagcctgccagggcgttgctgccggc
accaccgccgcgtgcaactga
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