Sinorhizobium garamanticum: PZN02_002385
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Entry
PZN02_002385 CDS
T09001
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
egi
Sinorhizobium garamanticum
Pathway
egi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PZN02_002385 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egi03019
]
PZN02_002385 (recQ)
03400 DNA repair and recombination proteins [BR:
egi03400
]
PZN02_002385 (recQ)
Enzymes [BR:
egi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PZN02_002385 (recQ)
Messenger RNA biogenesis [BR:
egi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PZN02_002385 (recQ)
DNA repair and recombination proteins [BR:
egi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PZN02_002385 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
HHH
Motif
Other DBs
NCBI-ProteinID:
WEX86127
LinkDB
All DBs
Position
1:2563091..2564956
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AA seq
621 aa
AA seq
DB search
MPQNDNASAARLFESEGVANPLDVLKRVYGYSAFRGQQGDVIEHVMAGGDAVVLFPTGAG
KSLCFQIPALCRNGVGIVVSPLIALMRDQVEALKQLGIRAAALNSSLTRDEAIAVRRALS
AGALDLLYVTPERAVTDGFAEMISGMEIALFAIDEAHCVSQWGHDFRPEYRGLDCLASRF
PGVPRVALTATADAHTRDDIIERLALTGAKVFTTSFDRPNIAYEIVERDQPRQQLLRFLS
RFKGSSGIVYCLSRAKVEDTAEWLNAQGVRALPYHAGMDRVLRDAHQDAFLKEENLCLVA
TVAFGMGIDKPDVRYVAHLDLPGSVEAYYQETGRAGRDGLPSEVWMAYGMADVIQRRRMI
DEGGAAEEIKRIERAKLNALLAICETVGCRRQAILAHFGEAHPGRCGHCDTCLKPVETWD
GTEAAIKALAAVYRTGERFGAGHVIDVLMGTVNEKTERFGHVDMPVFGAGKDLPARTWQS
VFRQLLAAGLVRVDHSAFGALQLEPEARAVFKRERQVFFRKDRPTSGKAARTAKSGAQRE
RADLAGSDLELFERLRVERFSIAKELNVPPYVVFPDTTLIALAKQRPRDFDDLLDIPGIG
ESKRERYGEAFLAVIDGYLDG
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagaacgacaatgcttccgccgcgcgcctgttcgaaagcgaaggcgttgccaat
cccctcgatgtcctgaaacgcgtctatggctattccgccttccgcggtcagcagggggac
gtcatcgagcatgtgatggcgggaggcgatgcggtggtgctcttcccgacgggggcgggc
aaatcgctctgctttcaaattcccgcactttgccgaaacggcgttggcatcgtcgtctcc
cccctgatcgccttgatgcgcgatcaggtcgaggcgttgaagcagctcggcattcgcgcc
gctgcgctcaattcctccctgacccgcgacgaggcgatcgcggtccgccgtgcgctttcg
gcgggcgcgctcgacctgctctatgtcacgccggagcgcgccgtcaccgacggtttcgcc
gagatgatcagcggtatggagattgcgctgttcgcgatcgacgaggcgcattgcgtctcg
cagtggggccatgatttccggccggaatatcgcggcctggattgtctcgcatcgcgcttt
cccggagtgccgcgcgtcgcacttacggccacggcggatgcgcatacgcgcgacgatatc
atcgagcggctggcgctcaccggagcgaaggtcttcacgaccagcttcgaccggccgaac
attgcctatgaaatcgtcgagcgtgatcagccgcgccagcagctccttcgcttcctctcc
cgcttcaagggatcgagcggcatcgtctattgcctgtcgcgcgctaaggtcgaggacacg
gcggaatggctgaacgcgcaaggcgtgcgcgcgcttccctatcatgccggaatggaccgc
gtcctgcgagacgcccatcaggacgccttcctgaaggaggagaatctttgcctcgtcgcg
acggtcgccttcggcatgggaatcgacaagccggatgtccgctacgtcgcccatctcgat
ctgccgggctcggtcgaagcctattatcaggagaccgggcgcgcgggtcgggacgggttg
ccctccgaggtctggatggcctatggcatggccgatgtcatccagcgtcggaggatgatc
gacgagggcggtgcagcggaggagatcaagcgcatcgagcgggcgaagctcaatgcgttg
cttgcaatctgcgagaccgtgggctgccgacggcaggcgatccttgcgcatttcggcgag
gcgcatcccggccgctgcggccattgcgacacctgcctgaagccggtcgagacctgggac
ggtaccgaagccgcaatcaaggcacttgcagctgtctatcggaccggcgagcgcttcggt
gccggccatgtgatcgatgtgcttatgggcacggtcaacgagaaaaccgagcgcttcggt
catgtcgatatgccggtcttcggtgccggcaaggacctgccggcacgaacgtggcaatcg
gtgttccggcagttgctcgccgccggcctcgtccgggttgatcattccgctttcggggca
ctccagctcgagccggaggcccgcgccgtcttcaaacgcgagcgccaggtgttcttccgc
aaggacaggccgacctcgggcaaggccgcccgaacggcgaaatccggcgcgcagcgcgag
agagccgatctcgccggctccgatctcgagcttttcgagcgcctgcgcgtcgagcggttc
tcgatcgccaaggaattgaacgtgccgccctatgtcgtcttcccggatacaacgttgatc
gcactggcgaagcagcgcccgcgggatttcgatgacctcctcgatattcccggtatcggc
gaaagcaagcgcgagcgctacggcgaggcattcctggccgtcattgacggctatctagat
gggtag
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