Sinorhizobium garamanticum: PZN02_002573
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Entry
PZN02_002573 CDS
T09001
Name
(GenBank) Do family serine endopeptidase
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
egi
Sinorhizobium garamanticum
Pathway
egi01503
Cationic antimicrobial peptide (CAMP) resistance
egi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
egi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PZN02_002573
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
PZN02_002573
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
egi01002
]
PZN02_002573
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
egi03110
]
PZN02_002573
Enzymes [BR:
egi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
PZN02_002573
Peptidases and inhibitors [BR:
egi01002
]
Serine peptidases
Family S1: chymotrypsin family
PZN02_002573
Chaperones and folding catalysts [BR:
egi03110
]
Other chaperones and cochaperones
DegP / HtrA
PZN02_002573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
PDZ_2
Trypsin
PDZ
PDZ_6
Peptidase_S29
Peptidase_S46
Motif
Other DBs
NCBI-ProteinID:
WEX86299
LinkDB
All DBs
Position
1:2770016..2771518
Genome browser
AA seq
500 aa
AA seq
DB search
MSTRPEFFRGLVLAAATALLLTNTALAETATSLPAAGPPSVADLAEGLLDAVVNISISQN
VKSDDDNAPMPQVPEGSPHQEFFDEFFKGQGGEGNRPRTVNSLGSGFVIDPTGFIVTNNH
VIQDADDIEINFSDGSKLKAKLVGMDTKTDLAVLKVEPKKPLKAVSFGDSRKIRIGDWVM
VVGNPFGLGVSVSVGVVSARGRNINAGPYDSFIQTDAAINRGNSGGPLFNMRGEVIGINT
AILSQTGMSVGIGFAVPTELAMNVVNQLKEFGETRRGWLGVRIQPVTDDIAESLKMERPR
GALVSGIIEGGPITKGEIKAGDIIIRFDGTDVAEIRDLMRAVGESPVGKMVDVIIIRDGK
EQTVRVTLGRLEDGEQLANAPAKENGEGAKPNEPPAAQLPASDVVLGMKLAVLDADRRKS
FGIADSVEGVVVTEVQPNSAAAERRVAAGDVIVEIGQEAMATPDDVSTRVEELKNDGRRN
ALLMIANKTGELRFVTVQME
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgacacgacccgaattcttccgcggcttggtgcttgcggccgcgacggcactgctt
ctgaccaacacggcgctcgccgagacggcaacctcactgccggcggccggaccgccgtcc
gttgccgacctcgccgagggactgctcgatgcggtggtcaacatttccatttcccagaac
gtcaagagcgatgatgataacgccccgatgccgcaggtgccggaagggtcgccgcatcag
gaattcttcgacgaattcttcaagggacagggcggcgagggtaaccgaccgcgaacggtc
aactcgcttggctccggtttcgttatcgatccgaccggcttcatcgtcaccaacaaccat
gtcatccaggacgcagatgacatcgaaatcaacttctcggacggctccaagctgaaggcg
aagctggttggcatggacaccaagaccgatctggcggtgctgaaggtcgagccgaaaaag
ccgctcaaggccgtttccttcggcgactcgcgcaagatccggatcggtgattgggtgatg
gtggtcggcaatccgttcggcctcggcgtgtccgtttcggtcggcgtcgtctcggcgcgc
gggcgcaacatcaatgccggcccctatgacagcttcatccagaccgacgccgcgatcaac
cgcggcaattcgggcggcccgctgttcaacatgcggggcgaggtgatcggcatcaatacc
gcgatcctctctcagaccggcatgtcggtcggcatcggtttcgccgtgccaacggaactg
gcaatgaacgtcgtcaatcaactcaaggaattcggcgagacccggcgcggttggctcggc
gttcgcattcagccggtcaccgacgatattgccgaaagcctgaagatggagagaccgcgc
ggtgcgctggtctccggtatcatcgaaggcgggccgatcaccaagggcgagatcaaggca
ggcgatatcatcatccgtttcgatggaacggatgtcgcggagatccgcgacctgatgcgc
gccgtcggcgagagcccggtcggcaagatggtcgacgtgatcatcattcgtgacggcaag
gagcagacggttcgtgtcacgctcggccggctcgaggatggcgagcaacttgcaaatgcg
ccggcgaaggagaacggcgaaggtgccaagccgaatgaaccacccgcagcgcagctgccg
gcgagcgacgtcgtactcggcatgaagctcgcagtgctcgacgccgatcgccgcaagagc
ttcggcattgccgatagcgtcgaaggcgtagtggtgaccgaggtccagccgaattcggcc
gcagccgagcgccgggtcgcagccggcgacgtgatcgtcgagatcggccaggaggcgatg
gccacgccggacgatgtttcgacgagagtcgaggaactgaagaacgatggccgccgcaac
gcgcttctgatgatcgccaacaagaccggcgagttgcgattcgtcaccgtgcagatggag
tag
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