Sinorhizobium garamanticum: PZN02_003577
Help
Entry
PZN02_003577 CDS
T09001
Symbol
secDF
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
egi
Sinorhizobium garamanticum
Pathway
egi02024
Quorum sensing
egi03060
Protein export
egi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
egi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PZN02_003577 (secDF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PZN02_003577 (secDF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PZN02_003577 (secDF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
egi02044
]
PZN02_003577 (secDF)
Secretion system [BR:
egi02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PZN02_003577 (secDF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
ACR_tran
SecD-TM1
Motif
Other DBs
NCBI-ProteinID:
WEX87208
LinkDB
All DBs
Position
1:complement(3789771..3792332)
Genome browser
AA seq
853 aa
AA seq
DB search
MPKFSPLKNAIIWLVVLAGFVFALPNLFSKEELAQWPAWAPQRQVPLGLDLQGGSDFTLR
VVRDDIIAERLETTIDTIGKALRTADIAYTGLSGSGQAIQFRVRDATKVPAARDALRQLT
APVDSAGLIRNQIQELVSEGADQGDVVRLRLTNEGIDLRVASAVTEAIDVVRRRIAEVSL
AEPSIQRRGNDRLVVQVPGLDDPQRLKDLLSQRADLTFRWLDPSMPVQQAVDTRPPAASE
ILYSLDDPPVPYLVERRAFVAAEDFAEAQPDYDPTTGEPVVSFKLDADALARITPLVEAD
SKRQFAIVLDGQVVSTPRLAETVTGDTGRISGNLSEDGTKNLAALLRAGPLPATLTVVEE
RTVGPGVGTDAIASALKAGMIAALAVAACMIAFYGFFGAIAVIAVIVNVVLIIAVLSLIG
ATLTLPGIAGIILTIGMAVDSNVLIYERLREEARGPGPLRKALDTGFSRVFSSIVDANLT
MAIAGAILFYFGSGAFRGFAVTLAIGSVTTILTAHSLTRRLVRGWYRRRRPSRLPRSIRT
GFFSEADIRFMAIRNPVFILMAALSLASLILLVSLGPNFGADFKGGSIIELRAKSGAADS
ADIRARLDELNLGEVRVQELGTERDVLVRVPSQEAGDNAEQTAIGLVRAELEDQYTFRRV
EVVGPAASDELTRASSLGIGAAVLAILLYVWIRFEWRFALGAMIATLHDVLLTIGFLVVT
RTEFNLASIAALLTIVCYSLNDTVVIYDRIRENYTRYRKMSLSVLIDASINQTLSRTILT
AVTTILALAALYLFGDGLLRSFSMTLLFGVVVGTLSSIYIAGPVLILFNRRGGRAGGQNP
ARDDEPNAATGTA
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagttctcgccgctgaaaaacgcgatcatctggcttgtcgtcctggccggtttt
gtttttgctctaccgaaccttttttcaaaggaagagctcgcgcaatggcccgcgtgggcg
ccgcaacggcaggtgccgctcggacttgatctccagggcggttccgactttacgctgagg
gtcgtccgcgacgacatcatcgccgaacggctcgagactacgatcgacacgatcggcaag
gctctgcggaccgccgacatcgcctatacgggcctgtcgggcagcggccaggcgatccag
ttccgggttcgcgatgcgacgaaggtcccggctgcgcgcgatgcattgcgccaactgacc
gctcccgtcgacagtgccggcctcattcggaatcagattcaggaactggtttcggaaggg
gcggatcagggcgatgtggttcgcctgcggctcaccaacgagggaatagacctcagggtg
gcctcggccgtgaccgaggccatcgacgtcgtacgccggcgcattgctgaagtcagtctc
gcagaaccatcgatacagcggcgcggcaacgatcgccttgtcgttcaagtgccaggcttg
gacgatccgcagcgattgaaggatctcctcagccagcgcgccgacctcaccttccggtgg
ctcgacccatcgatgcccgtgcaacaggcggtcgacacgaggccgccggcagcaagtgag
atcctctattcgctcgacgatcccccggttccctatcttgtcgaaaggcgagccttcgtc
gcggccgaggatttcgccgaggcgcaacctgattacgatccgacaaccggcgagcccgtc
gtcagtttcaagctcgacgccgacgcgctcgcgcgcatcacgccgcttgtggaggccgat
tccaaaaggcagttcgcgatcgtgcttgatgggcaggtggtgtcgacgccacggcttgcc
gaaacggttaccggcgacaccggccggatctcaggaaatctgtccgaggacggcaccaag
aacctcgccgccttgctgcgcgcgggaccactgccagcgaccctgactgtggtcgaggag
cgtaccgtcggccctggtgtcggaactgacgcgatcgcaagcgcgctcaaggccggcatg
atcgctgcactcgcggtagcggcgtgcatgatcgcgttctatggcttcttcggtgcgatt
gcggtgatcgcggtcatcgtgaatgtggtgctgatcattgcggtgctctcccttatcggc
gcgactttgaccttgccgggaatcgcggggatcatcctcacgatcggcatggcggtcgat
tcgaacgttctcatctacgagcgccttcgcgaggaggcgcgcggccccggaccgctgcga
aaggcactcgacaccggcttttcacgcgtcttcagcagcatcgtcgatgccaacctgacg
atggcgatcgccggtgccattcttttctatttcggctccggcgccttccgtggttttgcc
gtgacgcttgcgatcgggagcgtgacgacgatcctgaccgcccacagcctgacacgccga
ctggtccgtggatggtatcgccgccgccggccctctcgattgcctcgaagcatccgtacc
ggtttcttcagcgaggcggatattcggttcatggcgatccgcaatccggtctttattctg
atggccgcgctgtcgcttgcttcgctgatcttgcttgtcagcctaggccccaacttcggg
gcggatttcaagggcggatcgattatcgagcttcgcgcaaagtctggcgcggccgacagc
gcggatatccgcgctcgtcttgacgagctgaacctgggggaggtccgggttcaagaactc
ggcacggaacgagacgtcctcgtccgcgttccttcacaggaggccggtgacaatgcggaa
caaaccgcgattggattggttcgcgctgagctggaggaccagtacacgttccgccgggtt
gaggttgtcggaccggccgcttccgacgaactgacacgagccagcagcctcggtataggc
gcggcggtcttggccattctgctctatgtctggatccggttcgaatggcgatttgcgctc
ggcgcgatgatagcaaccctgcatgacgtgttgctgaccatcggcttccttgtcgtcacg
cgcaccgagttcaatcttgcgagcattgccgccctgctgaccatcgtctgctattcgttg
aacgataccgtcgttatttacgatcgcatccgtgagaattacacacgctatcgaaagatg
tcgctctcggtactcatcgatgcgtcgatcaaccagacgctttcacgcaccatcctgacg
gctgtaacgacgatattggcgcttgcagcgctctatctgtttggcgacggtctgcttcgc
tctttcagcatgacattgcttttcggcgtggttgtcggaacgctctcgtcgatttatatc
gcgggcccggttctcatactcttcaaccgccgaggcggccgagccggcgggcagaatccc
gctcgcgacgacgagccgaacgcggcaacagggacggcctga
DBGET
integrated database retrieval system
