Sinorhizobium garamanticum: PZN02_003739
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Entry
PZN02_003739 CDS
T09001
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
egi
Sinorhizobium garamanticum
Pathway
egi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
egi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PZN02_003739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egi03021
]
PZN02_003739
03400 DNA repair and recombination proteins [BR:
egi03400
]
PZN02_003739
Enzymes [BR:
egi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PZN02_003739
Transcription machinery [BR:
egi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PZN02_003739
DNA repair and recombination proteins [BR:
egi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PZN02_003739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
HHH_XRCC3_RpoA
IDH
Motif
Other DBs
NCBI-ProteinID:
WEX87355
UniProt:
A0ABY8DCW3
LinkDB
All DBs
Position
1:complement(3957016..3958026)
Genome browser
AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPNKVEFASSGRTRATLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDAKRMVVRKQGPGVVTAGDIQTVG
DIEILNPNHVICTLDEGAEIRMEFTVNNGKGYVPADRNRSEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLTMSIETDGSVTGEDAIAFAARILQDQLSVFVNFEEPHKEAEE
EAVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPSWPPENIEDLAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatccagaaaaattggcaggaattgatcaagccgaacaaggtggagttcgcctcctcc
ggccgcaccagggcaacgctggtcgcggaaccgcttgaacgcggctttggtctgacgctt
ggcaacgcgcttcgccgcgtgcttttgtcgtcgctgcgcggtgctgccgtcaccgcagtg
cagatcgacggcgtgctgcacgagttctcctctatcccgggtgtccgggaagacgtgacc
gacatcgtgctcaacatcaaggaaatcgccatcaagatggatggcgacgacgcaaagcgc
atggtcgtgcgcaagcagggcccgggcgttgtaacggccggtgacatccagacggttggc
gatatcgaaatcctcaacccgaaccatgtgatctgcacgctcgacgagggcgccgagatc
cgcatggagttcaccgtcaacaacggcaagggttacgtgccggctgaccgcaatcgctcg
gaagatgcgccgattggcctcattccggtcgacagcctgtactcgccagtcaagaaggtc
tcttacaaggtggaaaacacccgtgaaggccaggttctcgactacgacaagctgacgatg
tccatcgaaaccgatggctcggttaccggtgaagatgcgatcgcgtttgcggcccgcatt
cttcaggaccagctctcggtcttcgtcaacttcgaagagccgcacaaggaagcagaggaa
gaggcagtcaccgaactcgccttcaacccggcgcttctcaagaaggtcgacgaactggag
ctttccgtccgttcggccaactgcctgaagaacgacaacatcgtctatatcggcgacctc
attcagaagaccgaagcagaaatgctccgcacgccgaattttggtcgcaagtcgctcaac
gaaatcaaggaagttctcgcttccatgggcttgcacctcggcatggaagtgccgtcctgg
ccgcctgagaacatcgaagatctcgccaagcgttacgaagaccaatactaa
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