Sinorhizobium garamanticum: PZN02_003919
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Entry
PZN02_003919 CDS
T09001
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
egi
Sinorhizobium garamanticum
Brite
KEGG Orthology (KO) [BR:
egi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
egi01002
]
PZN02_003919
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
egi01011
]
PZN02_003919
Peptidases and inhibitors [BR:
egi01002
]
Cysteine peptidases
Family C82
PZN02_003919
Peptidoglycan biosynthesis and degradation proteins [BR:
egi01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
PZN02_003919
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GFIT
Motif
Pfam:
YkuD
PG_binding_1
DUF6493
Motif
Other DBs
NCBI-ProteinID:
WEX87517
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Position
1:complement(4132824..4134149)
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AA seq
441 aa
AA seq
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MSKKNGIDAFSRRAFLRSAATLGAVAWAGAANAQDALGEIINSPHRGSWDDQFDAKASRT
ATAVLSNTPVFGPETISHLQQAIFDYQQIVASGGWPIVTTSVRLELGVTDPSVQQLRQRL
MVSGDLPQSAGISSSFDSYVDGAVKRFQARHGLPADGVIGEYTLKALNVDAMTRLGQLET
NLVRLQSMSGDLGRRYVMVNIPAAYIEAVENGRVVLRHTAVVGKIDRQSPILNSKIYEVI
LNPYWTAPRSIVQKDIMPLMRKDPTYLERNAIRLFDGSGNEVSPETVDWNAEKAPNLMFR
QDPGKINAMSSTKINFHNEHAVYMHDTPQQGLFNKLMRFESSGCVRVQNVRDLSTWLLKE
TPGWSRQQMEATIKSGVNTPITLAEEVPVYFTYVTAWSAKDRVVQFRDDIYQRDGAAELA
LQTTTGVEQPAGSIEQDALPQ
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaagaacggaattgatgctttctcgcgccgtgcatttctgcgttcggccgca
acgctcggcgccgtcgcctgggcaggcgccgccaatgcccaggacgcattaggcgagatc
atcaattcgccgcaccgcggctcctgggacgaccagttcgacgccaaggcctcgcgcacg
gcgacggcggttctttccaacacgccggtcttcgggcccgaaacgatcagccatctccag
caggcgatctttgactatcagcagatcgttgcctccggcggttggccgattgtcacaacc
tcggtgaggctcgagctgggcgtcaccgatccctccgttcagcagttgcgccagcgcctg
atggtttccggcgatctgccgcagtcggccggcatttcctcttccttcgactcctatgtc
gacggtgcggtgaagcgcttccaggcgcgtcacggcctgccggccgatggcgtcatcggc
gaatacaccttgaaggcgctgaacgtcgacgccatgacgcgcctcggccagcttgaaacc
aacctcgtccgcctccagtcgatgtcgggcgatctcggccgccgctatgtgatggtcaat
attccggccgcctatatcgaggcagtcgagaatggccgtgtcgtgctgcgccacacggcg
gtcgtcggcaagatcgatcgccagtcgccgatcctcaattcgaagatctacgaggtcatc
ctcaatccctactggactgccccgcgctcgatcgtccagaaggacatcatgccgctgatg
cgcaaggatccgacctatctcgagcgcaacgcgatccgtctcttcgacggcagcggcaac
gaggtgtcgccagagacggtggactggaacgccgagaaggcgccgaacctgatgttccgg
caggaccccggcaagatcaacgcgatgtcctcgacgaagatcaacttccacaacgagcac
gcggtctacatgcacgacacgccgcagcagggcctgttcaacaagctgatgcgtttcgag
tcgtcgggctgcgtgcgcgtccagaacgtgcgcgacctctcgacctggctgctgaaggaa
acgcccggctggtcccgtcagcagatggaggcgacgatcaagtcgggtgtcaacacgccg
atcacactcgcggaggaagtaccggtttacttcacctatgtcaccgcctggtcggcaaag
gacagggtcgtgcagttccgcgacgacatctatcagcgcgacggtgctgccgagctcgcg
ctccagacgacaacgggagtcgaacagccagcgggctccatagaacaggacgctttgccg
caataa
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