Sinorhizobium garamanticum: PZN02_003930
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Entry
PZN02_003930 CDS
T09001
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
egi
Sinorhizobium garamanticum
Pathway
egi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PZN02_003930 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egi03019
]
PZN02_003930 (groL)
03110 Chaperones and folding catalysts [BR:
egi03110
]
PZN02_003930 (groL)
03029 Mitochondrial biogenesis [BR:
egi03029
]
PZN02_003930 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
egi04147
]
PZN02_003930 (groL)
Enzymes [BR:
egi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PZN02_003930 (groL)
Messenger RNA biogenesis [BR:
egi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PZN02_003930 (groL)
Chaperones and folding catalysts [BR:
egi03110
]
Heat shock proteins
HSP60 / Chaperonin
PZN02_003930 (groL)
Mitochondrial biogenesis [BR:
egi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PZN02_003930 (groL)
Exosome [BR:
egi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PZN02_003930 (groL)
Exosomal proteins of other body fluids (saliva and urine)
PZN02_003930 (groL)
Exosomal proteins of breast cancer cells
PZN02_003930 (groL)
Exosomal proteins of colorectal cancer cells
PZN02_003930 (groL)
Exosomal proteins of bladder cancer cells
PZN02_003930 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WEX87527
LinkDB
All DBs
Position
1:4144144..4145772
Genome browser
AA seq
542 aa
AA seq
DB search
MAAKEVKFNTDARDRMLRGVDIMANAVRVTLGPKGRNVVIDRSFGAPRITKDGVSVAKEI
ELEDKFENMGAQMLREVASRTSDVAGDGTTTATVLAQAIVKEGAKAVASGMNPMDLKRGI
DLAVDAIVKELKTHARKVSKNAEIAQVATISANGDAEIGRYLAEAMEKVGNEGVITVEEA
KTAEIELEVVEGMQFDRGYLSPYFITNQDKMRVEFEDPYILIHEKKLSNLQAMIPILESV
IQSGKPLLIIAEDVEGEALATLVVNKLRGGLKIVAVKAPGFGDRRKAMLEDIAILTGGTV
VSEDLGIKLENVTIDTLGRAKRVIVEKETTTIVDGAGEKADIAGRVSQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALHATRAAVEEGILPGGGVALL
RVVKTLDNVPTANDDQRVGVEIVRRAIEAPVRQIAENAGAEGSIVVGKLREKPDFAYGWN
AQTGEFGDLFDMGVIDPAKVVRAALQDAASVAGLLVTTEAMIAEKPRKEAPPPMPGAPGM
DF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaggaagtcaaattcaacaccgatgcccgcgaccgcatgctgcgcggcgtc
gacatcatggccaatgccgttcgggtcaccttgggccccaagggcagaaacgtggtcatc
gatagatcctttggagcgccacggatcaccaaggatggtgtgtcggtcgccaaggaaatc
gaactcgaggacaagttcgaaaacatgggcgcacagatgctgcgcgaagtggcttcgcgc
acgagcgacgttgccggcgatggcacgaccactgcgaccgtgcttgcccaggcgatcgtc
aaggaaggcgccaaggccgtcgcctccggaatgaacccgatggatctgaagcgcggcatc
gaccttgccgtcgacgcgatcgtcaaggaactcaagacccacgcccgcaaggtctcaaag
aatgctgaaatcgcccaggtggccacgatatcggccaacggcgatgcagagattgggcgt
tacctcgccgaggcgatggagaaggtcggcaacgagggcgtgatcaccgtcgaagaggca
aaaaccgcagagatcgagctcgaagtcgtcgaaggcatgcagttcgacaggggctatctc
tctccctatttcattaccaatcaggacaagatgcgggtcgagttcgaagatccctacatt
ttgatccacgaaaagaagctctccaatctccaggccatgatcccgattctcgaatcggtg
atccagtccggcaagccgctcttgatcatcgccgaggacgtcgagggtgaggcattggca
acgctcgtcgtcaacaaactgcgcggcggcctgaagatcgttgctgtcaaggcgcccggc
ttcggcgaccgccgcaaggcgatgctcgaagatatcgcaatcctcaccggcggcacggtg
gtttctgaggatctcggcataaagctcgagaacgtgacgatcgatacgctcgggcgggca
aagcgagtgatcgtcgaaaaggagacgacgaccatcgtcgatggcgccggtgagaaggcc
gatatcgccggacgcgtcagccagatcaaggcccagatcgaggaaaccacgtcggattac
gaccgagaaaagctgcaggagcggctcgccaagcttgccggcggcgtagctgtcatccgc
gtcggcggttcgaccgaagtcgaggtcaaggaaaagaaggaccgcgtcgacgacgccctg
catgcgacgcgggcggcggtcgaagaaggtattttgccaggcggcggcgttgcactgctg
cgcgtcgtcaagacgctcgacaacgtgccgacggccaatgacgaccagcgtgtcggcgtc
gagatcgtccgtcgtgcaatcgaggcccctgtgcgccagatcgccgagaacgcgggtgcc
gaagggtcgatcgtcgtgggcaaattgcgcgagaaaccggatttcgcctacggctggaac
gcgcagaccggggaattcggagacctattcgacatgggcgtaatcgatccggccaaggtc
gtgcgcgcagcactgcaggacgccgcctcggtggccggcctgctggtcaccacggaagcg
atgatcgccgagaaaccgaggaaggaagcgcctcctccaatgcccggcgcgccgggaatg
gatttctaa
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