Sinorhizobium garamanticum: PZN02_003940
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Entry
PZN02_003940 CDS
T09001
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
egi
Sinorhizobium garamanticum
Pathway
egi00190
Oxidative phosphorylation
egi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egi00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
PZN02_003940
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PZN02_003940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egi03019
]
PZN02_003940
Enzymes [BR:
egi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
PZN02_003940
Messenger RNA biogenesis [BR:
egi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PZN02_003940
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
WEX89583
UniProt:
A0ABY8DFB0
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All DBs
Position
1:complement(4157395..4159581)
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AA seq
728 aa
AA seq
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MDSATSAIMEHEASAEQLDLLTSPERFINREFSWLQFNRRVLEETLNTAHPLLERVRFLS
ISAANLDEFFMVRVAGIEGQVRQGIVLRSPDGKTPAEQLDDILKEIDNLQMEQQASLAVL
QQYLAKEDILIVRPASLSAQDRSWLANEFDQSIFPVLTPLSIDPAHPFPFIPNLGFSIGL
QLASKTGREPMTALLRLPVALDRFIRLPDVKNVIRYITLEDVVSQFIDRLFPGYEVQGSG
TFRIIRDSDIEVEEEAEDLVRFFETALKRRRRGSVIRIETDSEMPASLRQFVVQELGVPD
NRIAVLPGLLALNTLSEITRAPREDLRFEPYNPRFPERVREHAGDCLAAIREKDMVVHHP
YESFDVVVQFLLQAARDPDVLAIKQTLYRTSNDSPIVRALIDAADAGKSVTALVELKARF
DEEANIRWARDLERAGVQVVFGFIELKTHAKMSMVVRREEGKLRTYCHLGTGNYHPVTAK
IYTDLSFFTCNPVIAHDMANIFNFITGYGEPEAGMKLAVSPHTLRPRILKHIEEEIGHAE
AGRPAAIWMKMNSLVDPEIIDSLYKASRAGVEIDLVVRGICCLRPQVPGLSDNIRVKSIV
GRFLEHSRIFCFGNGHGLPSENALVYIGSADIMPRNLDRRVETLVPLINRTVHEQVLSQI
MLGNLIDNQQSYEILPDGTSRRMEVGKDAEPFNAQHYFMTNPSLSGRGEALKSSAPKLIA
GWKSGWRK
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggatagcgcgacgtctgcaatcatggaacacgaggcgtctgcggagcagctagacctg
ctgacgagccccgagcgctttatcaatcgcgaattctcctggcttcagttcaaccgtcgc
gtccttgaggaaacgctgaacacggcgcatccgttgctcgagcgtgttcgcttcctgtcg
atttcggccgccaacctcgacgagttcttcatggtccgcgtcgccggtatcgaaggccag
gtgcgccaggggattgtgcttcgcagccccgacggcaagacgccggccgaacagctcgac
gatattctcaaggaaatcgacaacctgcagatggagcagcaggcgtcgctcgccgtactg
cagcaatatctcgcgaaggaagacatcctcatcgtccgtcccgcctcgttgtccgcgcag
gaccggagctggctcgccaacgaattcgatcagtcgatcttcccggtgttgacgccgctg
tcgatcgatccggcgcatcctttcccgttcatccccaatctcggcttttcgatcgggctg
cagctcgccagcaagaccggacgcgagccgatgacggcgctgctgcgccttccggtggcg
ctcgaccggtttatccgcctgccggatgtgaagaatgtcatccgctacatcacgctcgag
gacgtggtcagccagttcatcgaccgccttttcccgggctacgaggtgcagggttcggga
accttccgtatcattcgtgacagcgatatcgaagtcgaggaagaggcagaagacctcgtc
cgcttcttcgagacggccctcaagcgccgccgtcgcggttcggtcatccgcatcgaaacg
gattcggaaatgccggcatcgctgcgccagttcgtggtgcaagagctcggcgttccggat
aaccgcatcgcggtgctgccaggcctccttgcgctcaacacgctttcggaaatcaccagg
gccccgcgcgaggatctgcgcttcgagccttacaatccgcgcttccccgagcgcgtgcgc
gagcatgccggcgattgcctggcggcaatccgcgaaaaggacatggtggtccatcacccg
tacgaatccttcgacgtcgtcgtgcagttcctcctgcaggcggcgcgcgatccggacgtg
ctggcgatcaagcagacgctctaccgcacctcgaacgacagcccgatcgtgcgtgccctg
atcgacgccgccgacgcgggcaaatcggtgacggcgcttgtcgagctcaaggcgcgattc
gatgaagaggcaaacatccgctgggcgcgcgatctggagcgcgctggcgttcaggtcgtc
ttcggattcatcgagctcaaaacacacgccaagatgtcgatggtcgtgcgccgggaggaa
ggcaagctcaggacctattgccacctcggcaccggcaactatcacccggtgaccgcgaag
atctacaccgacctgtcgttcttcacctgcaacccggtgattgcccacgacatggcgaac
atcttcaatttcatcaccggctatggtgaaccggaagctggcatgaagctggcggtgtcg
ccgcacacgctgcgcccgcggatcctcaagcatatcgaggaagagatcgggcatgcagag
gcgggccgtcctgccgcgatctggatgaagatgaactcgctcgtcgatccggaaatcatc
gactcgctctataaggcgagccgcgccggcgtcgaaatcgacctcgtcgtgcgtggcatc
tgctgcctgcgtccgcaggtgcccggcctctccgacaatatccgggtcaaatcgatcgtc
ggacgtttccttgagcattcgcgcatattctgcttcggcaatggccacggccttccgtcc
gaaaatgcacttgtctatatcggctccgcggatattatgccgcgcaatctggatcggcgg
gtcgagacgcttgtgcctctcatcaaccggactgtgcacgaacaggttctttcgcagatc
atgctgggcaatctcatcgacaaccagcagagctacgagattcttccggacggcacgtcg
cgccgcatggaagtcggcaaggatgccgagccgttcaatgcgcagcattacttcatgacc
aaccccagcctctcgggccggggcgaggctctgaaatccagtgcaccaaagctgattgcc
ggctggaaaagcggttggcgcaagtaa
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