Sinorhizobium garamanticum: PZN02_004890
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Entry
PZN02_004890 CDS
T09001
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
egi
Sinorhizobium garamanticum
Pathway
egi02010
ABC transporters
egi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
egi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PZN02_004890
03070 Bacterial secretion system
PZN02_004890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
egi02000
]
PZN02_004890
02044 Secretion system [BR:
egi02044
]
PZN02_004890
Transporters [BR:
egi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PZN02_004890
Secretion system [BR:
egi02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
PZN02_004890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_21
Zeta_toxin
AAA_16
AAA_22
ABC_ATPase
AAA_30
AAA_18
SbcC_Walker_B
nSTAND3
UQCC3
MoeA_C
DUF87
AAA_15
PRK
MobB
DUF6170
AAA_29
Motif
Other DBs
NCBI-ProteinID:
WEX91245
LinkDB
All DBs
Position
2:972200..974344
Genome browser
AA seq
714 aa
AA seq
DB search
MSTNPHTSLQCLVLVARHHGIDLSPERLLHDYALGDQPVATRQLLRMAKDAGLRARHVHL
TWRSLFQMGGAYPVLAELENGNWVVIAGVASDSEEEAIRILDPLAARPEFILLNESQFSK
AWHGSAVLLKRNYRLGDDDQPFGFRWFLPEIIRQRGLFRDVALAAVALYGLGLTTPIFFQ
LVIDKVLVHQSYATLTVLTIGIAVALVFDAAFTFLRRYLLLYATNKIDIRIATRTFGHLL
NLPIALFEQASAGVLVKHMQQTGRIREFLTGRLFLTLLDGLSLLVFVPILALYSVKLTFV
VLGFAALVGLVVMTLVGPFQQRLQALYQVEGDRQAMLVETVHGMRTVKSLALEPRQRRVW
DDHSARSISVRFRVEKISTFAQAITGLLEKLMSVAIVGLGALDVFSGSMTIGALVAFNML
AGRVSGPLVQIVTMIHEYQEVALSVRMLGEIMNQRPEQFGRGRGLRPDLKGLIEFDRVTF
RYGPDGAPALDDVSFTVPAGSVFGIVGKSGSGKTTVTRLIQGLYQNQQGIVRIDGHDSRE
IDLVHLRKSIGVVLQDNFLFRGTVRENIAAARTDASIEEIAAAARIAGAEEFIERLPRGF
ETLLEENASNLSGGQKQRLAIARALITDPKLLILDEATSALDPDSEAIVRQNLSKIAEGR
TVIIVSHRLSTLVDADAILVIERGKIADIGRHDQLVSRCMTYRHLWSQQTRQSA
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccaatccgcataccagtcttcagtgtctggtccttgtcgcccgtcaccatggc
atcgacctttcgcccgaacggctgctgcatgactacgcactgggggaccagccggtcgcg
acccggcagctcctccgcatggcgaaagatgccggcttgcgtgcccggcacgtacatctc
acctggcggtcgctctttcagatgggcggcgcctaccccgtgcttgccgaactcgagaac
ggcaactgggtcgtcatcgccggcgttgcgagcgacagcgaggaggaggcgatccggatt
ctcgatccgcttgcggcgcgccccgaattcatcctcttgaatgagagccaattttccaag
gcctggcacggctccgcggtcctcctgaagcgcaattaccgtctcggcgacgatgaccag
cccttcggctttcgctggttcttgccggagatcatacgccaacgcgggcttttccgggac
gtggcgcttgcggccgtcgccctttacggcctcggcctcaccacgccgatctttttccag
ctcgtcatcgacaaggtgctggtgcatcagagctacgcaacgctgacggttctcaccatc
ggcatcgcagtcgccctggtcttcgatgccgcctttaccttcctgcggcgctatctcctg
ctctatgcaaccaacaagatcgatatcaggatagcgacacgcaccttcgggcatctcctg
aacctgccgatcgcgctcttcgaacaggcgtcggccggtgtcctcgtcaagcatatgcag
cagacagggcgcattcgcgaatttctgaccggcaggctcttcctcaccctgctcgacggc
ctctcgctcctcgtgttcgtgccgatcctcgccctctacagcgtcaaactcaccttcgtg
gtgctcggctttgccgcgctggttggtctcgtcgtaatgacgctggtggggccgttccag
caacggctccaagctctctatcaggttgaaggcgatcgacaggccatgctcgtggaaacg
gtccacggcatgcgcacggtcaagtcgctggcgctcgagccgcgccaacgccgggtgtgg
gacgaccattcggcccgctcgatctccgtgcgcttccgcgtcgagaagatttcgacgttc
gcgcaggccataacggggctcctggaaaagctgatgagcgtggcgatcgtcgggttgggc
gcgctcgatgtgttcagcgggtcgatgacaatcggcgcgctcgtcgcattcaacatgctg
gccggccgggtttccgggccccttgtccagatcgtcaccatgatccacgaatatcaggaa
gtggcgctatccgtgcgcatgctcggtgagatcatgaaccagcgcccggaacaattcggg
cgtggacgcgggctcaggccagatctcaaagggctgatcgagttcgacagggtgactttc
cgatacgggcccgacggcgcccctgcactcgacgatgtctccttcacggttcccgcgggc
tccgtcttcggcatcgtcggcaagagcggctcgggaaagacaaccgtcacgcggcttatc
cagggcctctatcagaaccagcagggaatcgtgcgcatagacggccatgacagccgcgag
atcgatctcgttcatttgagaaagagcatcggcgtcgtgctgcaggacaatttcctgttc
cggggtacggttcgcgaaaacatcgcggcggcaaggacggatgcgagcatcgaggagatc
gccgcggccgcacgcatcgccggggcggaggaattcatcgagcggctgcctcgcggcttc
gaaaccctgctcgaggaaaacgcctccaatctctccggcggccagaagcagcgtcttgca
attgcccgcgcgctgatcaccgatcccaaattgctcattctcgacgaggcgacgagtgct
ctcgaccccgacagcgaggcaatcgtcagacagaacctctccaagatcgccgagggacgc
actgtcatcatcgtctcgcaccgcctgtccacacttgtcgatgccgatgcgatcctggtc
atcgagcgcggcaagatcgccgatatcggtcgccacgaccagctcgtttcacgctgcatg
acctatcgccacctgtggtcacagcagacaaggcagtccgcatga
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