Sinorhizobium garamanticum: PZN02_005080
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Entry
PZN02_005080 CDS
T09001
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
egi
Sinorhizobium garamanticum
Pathway
egi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
egi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PZN02_005080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
egi02000
]
PZN02_005080
Transporters [BR:
egi02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PZN02_005080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
IHHNV_capsid
Motif
Other DBs
NCBI-ProteinID:
WEX89765
LinkDB
All DBs
Position
2:complement(1186827..1188728)
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AA seq
633 aa
AA seq
DB search
MITRRTALAMLASTVLPPRLLAAGTEAEALAPLVAEGKLPPLNERLPKTPRVINVAARGR
TPGKHGGTIRSIIGSAKDIRLMTVYGYCRLVGFDEQLNLQADVLESYETVEDRIFTLRLR
EGHRWSDGTPLTTEDFRYCWEDVLLNEDLSPAGLPTALVMDGEAGKFEIVDERTVRYSWT
RPNPDFLQKLAAPQPLVIVMPSAYLKQFHKKYQDEDKLKATMKEERVKKWSQLHMRMARS
YRPENPDLPTLDPWRNTTPLPAEQFIFERNPYFHRVDENGLQLPYIDKFVLNVSSSSLIP
AKTGTGESDLQAAGIDFVDYTFLKDAEKRYPIKVKLWKKTQGSRLALLPNLNASDPVWRP
LLQDVRVRRALSLAIDRREINMAVFYGLTKESADTVLPESPLFRPEFASAWVAHDPDQAN
SLLDAAGLAKRGSDGIRILPDGRAAQIVVETAGESTLETDVLQLITDYWRNVGISLFIRT
SQRDTFRSRAVGGEIIMSMWFGIDNGVPTAKMNPGQLAPTADDQLQWPVWGLNYLSHGEM
GEAPQLPPVVELLDLLKRWRHSSTDAERTEIWKSMLSIYTDQVFSIGLVNASLQPIVVSS
KLRNVPEEALYGFEPTSYFGVYNPDTFWLEQDT
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgatcacccggagaaccgcgctggcgatgctggcttccaccgttctgccgccgcgcctg
cttgcggcgggaacggaggccgaggcgctcgcgccgctggttgcggaaggcaaacttcct
ccgctcaatgagcgactgccgaaaacgccgcgcgtgatcaatgtcgcggccagagggcgc
acgcccggtaagcatggcggcacgatccgaagcatcatcggcagtgccaaggatatccgc
ctgatgacggtctacggctattgccggctggtcggcttcgacgagcaactgaaccttcag
gccgacgttctcgaaagctacgaaacggtcgaggaccgcatcttcaccctgcgcctgcgc
gagggccacaggtggtcggatggcacgccgcttacgacggaagacttccgctactgctgg
gaagatgtgctgctcaacgaggacctctctccggcgggtcttccgacggcgctggtcatg
gatggcgaagcgggtaagttcgagatcgtcgacgagcgcacggtgcgttactcctggacg
aggccgaacccggattttctgcagaagctcgccgctccgcagccgttggtcatcgtcatg
ccgtcggcctatctcaagcagttccacaagaagtatcaggacgaggacaagctcaaggca
acgatgaaggaagagcgggtcaagaagtggagccagctgcacatgcgcatggcacgctcc
tatcgcccggaaaaccctgatttgccgacgctcgatccctggcggaacaccacaccgctt
cccgccgagcagttcattttcgagcgcaatccctatttccaccgggtcgacgaaaacggc
ctgcaactgccctacatcgacaagttcgtgctcaacgtcagctcctcctcgctcatcccg
gcgaaaaccggcacgggcgaaagcgatctccaggcggcgggcatcgatttcgtcgactac
actttcctgaaggatgcggagaaacgctatccgataaaggtcaagctgtggaagaagacg
cagggatcgcgtctggcgctgcttcccaatctcaatgcttccgatccggtctggcgtccc
cttctgcaggatgtccgtgtccggcgagcgctgtcgctggcgatcgaccggcgcgaaatc
aacatggcggtcttctatggtttgaccaaggagagcgccgatacggtgctgccggaaagt
ccgctgttccgtcccgaattcgcaagcgcctgggtggcccacgatccggaccaggccaac
agcctgctcgacgcggcgggtctggcgaagcgcggcagcgatgggatccgtatcctgccg
gatggacgggcggcgcagatcgtcgtcgagacggcgggcgaaagcacgcttgagaccgac
gttctgcagctgataaccgactactggcggaatgtcggcatttcgctcttcatccgcact
tcccagcgcgacaccttccgcagccgggcggtcggcggcgagatcatcatgtccatgtgg
ttcggcatcgacaacggcgttccgaccgcgaagatgaacccgggtcaactggcaccgacg
gccgacgatcagttgcagtggcctgtctggggattgaattacctgtcgcacggggaaatg
ggagaggcaccgcagctgccgcctgtggtcgagcttcttgacttgctcaagcgctggcgg
cattcgagcaccgacgcggagcggacggaaatctggaaatcgatgctgtcgatctacacc
gatcaggtcttctcgatcggcctcgtcaatgcatcgctgcagccgatcgtcgtctcctcc
aagctccgcaatgtaccggaagaggcgctctacggcttcgaaccgacgagctatttcggc
gtttacaaccccgacaccttctggcttgaacaggatacctga
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