Sinorhizobium garamanticum: PZN02_005295
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Entry
PZN02_005295 CDS
T09001
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
egi
Sinorhizobium garamanticum
Pathway
egi03420
Nucleotide excision repair
egi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
egi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PZN02_005295
03430 Mismatch repair
PZN02_005295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egi03400
]
PZN02_005295
Enzymes [BR:
egi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PZN02_005295
DNA repair and recombination proteins [BR:
egi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PZN02_005295
MMR (mismatch excision repair)
Other MMR factors
PZN02_005295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
WEX89957
LinkDB
All DBs
Position
2:complement(1429115..1430962)
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AA seq
615 aa
AA seq
DB search
MVAGAGSGKTTSLIKGLASILAIHGERLRLRRQRVACITYTEIAAAEIWADVGNNPLVHV
STIHSFLWSIARGFQQDIAAWVATRIDERIGELQRAAANFGPRVQQKTRDKNARDIVRYE
QQREAITRVRTFTYGTGSDYAKGILGHDDIIKMASQLMIHRPLFRTLVAQQFPFVFVDES
QDTFPVVVEALMAVQQQEQARFCLGFFGDPMQRIYPTGIGTVPKPDGWRAIPKPENFRSP
TTVLNLANAIRRDGDDLVQVGGRKKKEGEQEVPFVGTARLFVLPTDAHRDERVAQVRTWV
AKANNDEMWQPVAENDPVKMLVIVHRMAAKRLGFGDLYAAFNDRAPDAFKNGFLDATAWP
LRPLVSFLLPLAEAVRDGRDFDTMRLLRLHSPLLVKANLQGVNVAERLNQLQAVSNQIGE
LMGPESQATIRDVLMLAKESCLVAFDPRLSAYLEDVAANEPEAEENEDGEAEGEEDPSNE
INSMAAFLACPANQLRPYQAYVNEESPFSTQQGVKGAEFDRVLVVLDDDEGTHFQFSYEK
YFGLKELSARDKKTLEEGGESSVERTRRLFYVCCTRARQDLAVVLFVADPAAAIAHIRGL
GLFSEADILSQDALA
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccggggcgggttcgggcaaaaccacgtcgctgatcaaggggctcgcctcgatc
ctcgccatccacggcgagcgtttgcggctacgcaggcagcgcgtggcttgcatcacctat
actgagatcgccgccgcggagatttgggcggacgtggggaataaccccctcgttcacgtc
tccacgatccatagtttcctttggtcgatcgcgcgcggcttccagcaagatatcgccgct
tgggtcgcgaccaggatcgatgagcggatcggtgaattgcagcgcgccgccgccaatttt
ggccctcgcgttcagcagaaaacgcgggacaagaacgcccgcgatatcgtgcgttacgag
cagcagcgcgaggctatcactcgggttcgtaccttcacttatggaaccggaagtgattac
gcgaagggcatcctcggccacgacgacatcatcaagatggcttcgcagttgatgatccat
cgcccgcttttccgaactctcgtcgcgcagcaatttccgttcgttttcgtggatgagagc
caggatacctttcccgtcgtcgtcgaagccttgatggcggtccagcagcaggagcaggcc
cgcttttgcctggggttcttcggcgacccgatgcagcgcatttatcccaccggcatcggc
acggttccgaaacctgacggttggcgggcgatccccaagccggaaaacttccgttcgccg
accacggtattgaatctcgcgaacgctatccggcgtgacggcgacgatctggttcaggtc
ggcggccggaagaagaaagaaggcgagcaggaggtgccgttcgtaggcacggcgcgactg
ttcgtcctgccgaccgacgctcatcgcgacgaacgcgtggcgcaagttcggacgtgggtt
gccaaggcaaacaatgacgagatgtggcagcccgtagccgagaacgatccggtgaaaatg
ctggtgatcgtgcatcgcatggcggcgaagcgattgggtttcggagacctctacgcagcg
ttcaacgatagggcgccggacgctttcaaaaatggatttctggacgcgacggcttggccg
ttgcgacccttggtttcgtttctcctgccgcttgcggaggctgtccgcgacgggcgagac
ttcgatacgatgcgactgcttcgcctccattcaccgctgctcgtgaaggccaacctgcaa
ggagtgaacgtcgccgagcgcctcaatcaacttcaggctgtgagtaatcagatcggtgag
ctgatggggccggaatcgcaggcgaccatccgtgacgtgttgatgcttgccaaagaaagc
tgtttggtggcgtttgacccccgcctgtccgcttaccttgaagatgtcgcggcgaacgaa
cccgaagccgaagagaacgaagacggtgaagcggagggggaggaagatccttcaaacgag
atcaattcgatggccgcgttcctcgcgtgcccggccaatcagctccgtccttatcaggct
tacgtcaacgaggagtcgcctttctctacccagcaaggcgtgaagggcgctgagtttgat
cgcgtgcttgttgtcctcgacgacgacgaaggcacgcactttcaattctcctatgaaaaa
tactttgggcttaaggagctttccgcgcgggacaaaaagacgctggaggaaggcggtgaa
agcagcgtcgagcgaacgaggcggctcttctacgtttgctgcacacgtgctcggcaagac
ctggcggtcgttcttttcgtggccgatcccgcagcggcgatagcgcatattcgcgggctc
gggctcttctcggaagcggatatcctctcgcaggacgcgctcgcttag
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