KEGG   Sinorhizobium garamanticum: PZN02_005583
Entry
PZN02_005583      CDS       T09001                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
egi  Sinorhizobium garamanticum
Pathway
egi02020  Two-component system
Brite
KEGG Orthology (KO) [BR:egi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PZN02_005583
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:egi02022]
    PZN02_005583
Two-component system [BR:egi02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   PZN02_005583
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 AAA_2 AAA_16 Mg_chelatase RTP1_C2 AAA FleQ Zeta_toxin TrmB T2SSE
Other DBs
NCBI-ProteinID: WEX90217
UniProt: A0ABY8DJ49
LinkDB
Position
2:complement(1731105..1732475)
AA seq 456 aa
MSDAASVFLIDDDRDLRKAMQQTLELAGFTVSPFASAVEALGALSPEFDGVVISDIRMPG
LDGLAFFQKVAALDPDLPVILVTGHGDIPMAVQAIQDGVYDFIAKPFAADRLVQSARRAV
EKRRLVMENRALRRAAEAASDSLPLIGQTPVMERLRQTLKHIADTDVDVLVAGETGSGKE
VVATLLHQWSRRSNGNFVALNCGALPETVIESELFGHEPGAFTGAVKKRIGRIEHASGGT
LFLDEIEAMPPATQVKMLRVLEAREITPLGTNETRPVDIRVVAAAKVDLGDPAERGDFRE
DLYYRLNVVTLSIPPLRERREDIPLLFSHFLSRAAERFERDVPSVSPAVQQHLMSHSWPG
NVRELSHFAERVALGVEGNLGNPLPPAADAGASLPERLERYEAEILKEALTAHRGDVKET
LEALGIPRKTFYDKLQRHGINRADYVERAAPPDNRA
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgagcgacgccgcatccgttttcctgatcgacgacgaccgcgacttgcgcaaggcgatg
cagcagacccttgagcttgccggctttacggtctcgcccttcgccagcgcggtcgaagct
cttggagccctgagccccgaattcgacggggtcgtcatcagcgacatccgcatgccgggt
ctcgatgggcttgctttcttccagaaggtggccgccctcgacccggaccttcccgtcatt
ctggtcaccggacatggcgatatcccgatggcggtccaggccattcaggatggggtctat
gatttcattgccaagccctttgccgccgatcggctcgtccagagcgcgcggcgcgccgtg
gagaagcgtcgcctggtgatggaaaaccgtgcgctccgacgcgccgcggaagccgcctcc
gacagcctgccgctgatcggccagacgccggtgatggaacggctgcggcagacgttgaaa
cacatcgctgacaccgacgtcgatgtgctggtcgccggcgagaccggcagcggcaaggag
gtcgttgcgaccctcctgcaccagtggagccggcgcagcaatggcaatttcgtggcgctc
aactgcggcgccctccccgaaacggtgatcgagagcgagctcttcggccacgagccgggc
gccttcaccggagccgtgaaaaagcggatcggccggatcgagcatgcaagcggcggcacg
ctgtttctcgacgagatcgaggcgatgccgccggcaacccaggtcaagatgctgcgtgta
cttgaagcgcgcgagatcaccccgctcggcaccaacgagacacggccggtcgacatccgg
gtcgttgccgctgccaaggtcgacctcggcgatccggcggagcgcggcgactttcgtgag
gacctctactaccggctgaatgtcgtgacgctttcgatcccgccgttgcgcgagcggcgc
gaggacatcccgctgctcttctcgcatttcctgagccgggcggcggaacgtttcgagcgt
gacgttccatcggtttctccggctgtccagcaacacctgatgtcgcattcctggcccggc
aatgtgcgcgaactgtcgcattttgccgagcgtgtggcgcttggcgttgaaggaaacctc
ggcaacccgctcccgccagcggccgacgccggggcatcgcttccggagcggctggagcgc
tacgaggccgagatcttgaaggaagccctgacggcgcatcggggcgacgtcaaggaaacg
ctggaagcgctcggcattccccgcaagaccttttatgacaagctgcaacgtcacggcatc
aaccgggcggactatgtcgagcgggctgcgccgccagacaatcgcgcctga

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