Sinorhizobium garamanticum: PZN02_005692
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Entry
PZN02_005692 CDS
T09001
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
egi
Sinorhizobium garamanticum
Pathway
egi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
egi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PZN02_005692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egi03400
]
PZN02_005692
Enzymes [BR:
egi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PZN02_005692
DNA repair and recombination proteins [BR:
egi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PZN02_005692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WEX90319
LinkDB
All DBs
Position
2:complement(1841590..1842291)
Genome browser
AA seq
233 aa
AA seq
DB search
MEARNKARQQMSRTAAKTGPALSGEHANAHSIAALRRQAESCERCDLYKNATQLVFGEGP
VDARIVLVGEQPGDREDLAGHPFVGPAGRVLDECLHEAGVDRSSCYLTNAVKHFKFEQRG
KRRLHSRPNAGEIQRCAWWLGAELEQLRPDLVVALGATAVVTLLGRSAGVTKNRGDLIDT
PAGYPVLVTIHPSYLLRIQDGDDAASERARFVKDLAKVAAYEADRVGRTQRRL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
ttggaagcgaggaacaaggctcggcaacagatgtcgcgaacagcagcaaaaacggggccg
gctctttccggcgagcatgcgaatgcgcactccatcgcggccttgcgtaggcaagcggaa
agctgcgaacgctgcgacctctacaagaacgcgacacaactcgtcttcggcgagggccct
gtcgacgcccgcatcgttctggtcggcgaacagccgggtgaccgagaggatctggcggga
catccgttcgtcggcccggccggtcgggttctcgacgaatgcctgcatgaggcaggagtc
gatcgctcaagctgctatctcaccaatgcggtcaagcacttcaagttcgagcagcgcggc
aagcggcgcttgcattcgcggccgaatgcgggcgagatccagcgttgcgcctggtggctg
ggtgccgagttggaacagcttcgaccggacctcgtcgttgcgctcggcgccacggcggtg
gtcacgctgctcggtcggagcgccggggttacgaagaatcgtggcgatctgatcgacact
ccagccggctatccggtcctcgtcacgatccatccgtcctatcttctcagaatccaggac
ggagacgacgcggcgagcgaacgtgcgcgtttcgtcaaggacctggcaaaggtcgctgcc
tatgaagctgatcgcgtcggtcggacgcagcgccgtctataa
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