Sinorhizobium garamanticum: PZN02_005695
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Entry
PZN02_005695 CDS
T09001
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
egi
Sinorhizobium garamanticum
Brite
KEGG Orthology (KO) [BR:
egi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
egi03032
]
PZN02_005695
03400 DNA repair and recombination proteins [BR:
egi03400
]
PZN02_005695
Enzymes [BR:
egi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PZN02_005695
DNA replication proteins [BR:
egi03032
]
Prokaryotic type
DNA Topoisomerases
PZN02_005695
DNA repair and recombination proteins [BR:
egi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PZN02_005695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WEX90322
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All DBs
Position
2:1846429..1847478
Genome browser
AA seq
349 aa
AA seq
DB search
MARSGEPALEENGLVYVSDTEPGIRRQRKGRGFVYRLPDGSALSDPAVKARISSLGLPPA
YENVWICLDASGHLQATGYDARGRKQYRYHKEWQALRSGDKFGQLPTFGKVLPRIRRTMR
RHMQGAPDDIRTVLAALVALLDEAHLRVGSPAYVEANASYGATTLLKRHLKLSDGCVQLS
FTGKGGKRVRRRLRHPRLQRLLEEIADLPGRQLFVWKDETDTLRPIDSGRLNRYLAEISG
AAISAKTFRTWAGSVAAFTVARAALERGERPTVKQMSEAAASVLHNTPAIARESYIHPQI
VALAGDNQVSAKTLGERGRANNELRAEEARMLNFLTRAERSRRRRLCRD
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggctagaagcggcgagcccgcgctcgaggaaaacggcctcgtctacgtaagcgacacc
gagccaggaatcaggcgacagcgcaaaggtcgaggcttcgtttatcgtctgccggacggt
tcggcgctttccgaccccgcggtgaaggcgcgcatatcgtctctgggcctgccgcctgcc
tacgagaacgtctggatctgcctggatgcgagcggccatctccaggccacgggctacgac
gcgcgcggccggaagcaatatcggtatcacaaggaatggcaggcgctgcgaagcggcgac
aagttcggacagcttccgacattcggaaaggtgctgcccaggatccgccgcacgatgcgg
cgccatatgcagggtgctcccgacgacatccgcacggttctggcggcgctggtggcgctc
ctcgacgaggctcacctgcgtgtcggcagtccggcctatgtcgaggccaatgcgagctac
ggcgcgacgactttgctcaagcgccacctcaaactctcggatggctgcgtccagctgagc
ttcaccggcaagggcggcaagcgagtgaggcgcaggctccgccatccgagattgcagcgg
ttgcttgaagagattgcggacttgccgggccggcagcttttcgtctggaaggatgagacc
gacacgttgcggccgatcgattctgggcgcctcaatcgctatcttgcagagatttcgggc
gcagcgatttcggcgaaaacctttcgaacctgggcgggaagcgtcgcggcatttacggtc
gcacgcgccgctctcgagcgaggggaacggccaacggtcaagcagatgagcgaggccgcc
gcatccgtcctgcacaacacgcccgcaatcgcacgcgagagctacatccatccgcagatc
gtcgcgcttgccggtgacaaccaggtctcagccaaaacactcggggagcgcggccgtgcg
aacaacgaattgcgcgccgaggaggcgcgcatgctgaattttctcactcgtgcggagcga
tcgaggcgtcggagactctgccgagactaa
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