Sinorhizobium garamanticum: PZN02_005796
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Entry
PZN02_005796 CDS
T09001
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
egi
Sinorhizobium garamanticum
Pathway
egi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
egi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PZN02_005796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egi03400
]
PZN02_005796
DNA repair and recombination proteins [BR:
egi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
PZN02_005796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF6250
Choline_bind_2
Motif
Other DBs
NCBI-ProteinID:
WEX90417
LinkDB
All DBs
Position
2:complement(1947250..1948122)
Genome browser
AA seq
290 aa
AA seq
DB search
MAPRASWKGYLRLSLVSCPVRLYPATSSSERITFNQLHKKTHNRINMKPVDPELGLVERS
DLVKGYEYEDKKYIIIEDADLESVKIESNHTMNIEAFVDEGSVDVIYQDAPYYLAPDGAM
AEETFIVLREALRKSGKLAIARLVLSSRERVITIGPRETGMFVCTLRNPNEVRGTAEYFG
NIPVGNPDPEMLQLAEALIEQKLTTFDPKNYEDRYEIALMQMIREKLKGHKPIIAAAPER
GNVINLMDALKASLSQSKPPAKSKPKAEPAAKRTAKPATTSGKPAAKKKV
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccagggcaagttggaaaggttatctcaggcttagtctcgtaagttgtcccgtc
aggctttacccagccaccagttcaagtgaacgcatcaccttcaaccagcttcacaagaag
acccacaaccggatcaacatgaagccggtggatccggagctcgggctggtcgagcggtcc
gatctggtgaagggctacgagtacgaggacaagaaatacatcatcatcgaggatgccgat
ctcgaaagcgtcaagatcgaatccaaccacacgatgaacatcgaggcgttcgtcgacgaa
ggatcggtggacgtcatctaccaggatgcgccctattatcttgcaccggacggcgcgatg
gcggaggaaaccttcatcgtgttgcgcgaagcgttgcgaaagtccggcaagctggcgatc
gcgcgcctcgtgctttccagccgcgaacgggtgattaccattggtccgcgtgagaccggc
atgttcgtctgcacgctccggaacccgaacgaggtgcgcggcaccgcggagtatttcggc
aatattccggtcggaaaccctgaccctgaaatgctgcagcttgccgaagcgctcatcgag
cagaagctcacgaccttcgatcccaagaattacgaggatcgctacgagatcgcgctgatg
cagatgatccgcgagaagctcaagggccacaagccgatcattgcggcggcgcccgagcgc
ggcaacgtcatcaatctcatggatgctctgaaggcgagcctttctcaatcgaaaccgccc
gccaagagcaagcccaaggccgagccggcggccaagcgaacggcgaagccagcaacgacc
agcggcaagccggcggccaagaaaaaagtctga
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