Sinorhizobium garamanticum: PZN02_005995
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Entry
PZN02_005995 CDS
T09001
Name
(GenBank) radical SAM protein
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
egi
Sinorhizobium garamanticum
Pathway
egi00860
Porphyrin metabolism
egi01100
Metabolic pathways
egi01110
Biosynthesis of secondary metabolites
egi01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
egi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PZN02_005995
Enzymes [BR:
egi01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
PZN02_005995
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
WEX91698
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All DBs
Position
unnamed:complement(162683..164134)
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AA seq
483 aa
AA seq
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MNREALNSLNDIDADYPVPRVYDFLSCPENSAFLQYVFKDPFGCHVFPGDISRYPRDSFF
DDMDRDIKQAKQIHLWSYIPTCRYRCHFCQYPTVTLNPEATSSLAVFRELVDYNIKEATI
WLRSVPCLAQAEVGEFNIFGGTPSLLPEPELRRLMDFYRSHFNFSAATMRFEGEPRTLTK
DYLRLLKELGFTKISFGAQAFNDRIITACGRMHSAEECVGTIYNAGEVGFEWVSVDLIYG
MLGQSVDDVKYDMEKTLELDLSHVVCTKLHMEEFMKKRTGVSGERESLWQKKGRVNINNM
TFPGLGKQYQMRELVEQYLLPGYVEHPTMYFHRNNQHPEKWKGLITDLDTQYPEVAIGLG
GSSKCTWAEAINITGYKKYKEALDENRLPIEESRGVSSLQREVNAFKMALSTLVPVNDNV
FRQRFEGRSFFDNPIIRRTLMTLVDKALVTADRDAVTLTPNGVTLVEAIINTQFLAPEAR
GAH
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaatagagaagctctgaactcgctgaacgatatcgatgcggactatccggtgccgcga
gtatacgattttctctcgtgcccggagaacagcgcatttctgcagtatgtgtttaaagat
ccgttcggttgccacgttttccccggtgatatctcccgttatccacgcgattcttttttc
gatgacatggaccgtgatatcaaacaggcaaagcagatacacctgtggtcgtatatcccc
acctgccgctaccgttgccatttctgccaatacccaacggttactctaaacccagaggcc
acttcctcgctggctgtgttccgggaactagtagattataatatcaaagaggccaccatc
tggcttcggagcgttccgtgccttgcacaggccgaagtcggcgaatttaacatcttcggt
ggcacgccatcactgcttcctgaacctgagctacggcgcctgatggatttttaccggagc
cattttaacttttctgccgccaccatgcgctttgaaggcgagcctcggaccctcactaaa
gactatctgcggctgttaaaagagttgggttttaccaaaataagcttcggtgctcaggcc
ttcaacgaccgcattatcacggcctgcggacgtatgcattctgccgaagagtgtgtggga
accatctataacgcgggcgaagtcgggttcgaatgggtcagcgttgaccttatctacggc
atgttgggccagagcgtggatgacgtgaaatatgacatggagaaaaccctcgagctggac
ctttcacacgtagtctgcaccaagttgcacatggaagagttcatgaaaaagcgtaccggc
gtttccggggaacgagaaagcctgtggcagaaaaagggccgtgttaatatcaacaacatg
actttcccggggctcggcaagcagtatcagatgcgcgaactggtcgaacagtatctcttg
ccaggttatgtggaacacccgacgatgtatttccaccggaataatcagcatccggaaaaa
tggaaagggttaatcaccgaccttgatacgcagtacccggaagtggcaattggcctcggt
ggtagctcgaaatgcacctgggccgaagccatcaacatcaccggctacaaaaaatacaag
gaagcgctggatgaaaaccgtctgcccattgaggaaagccggggcgtctcctcgcttcag
cgcgaagttaacgccttcaaaatggcgctttccacgctggttccggtgaatgacaatgtg
ttcagacaacgttttgaaggcagaagctttttcgacaacccgattatccgccgcacgctc
atgacactagtcgataaagcgctggtcaccgccgacagggatgcggtgacgctcaccccc
aacggggtaacgctagtcgaagccataatcaacacccagttcctagcacccgaagcccga
ggagcacactag
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