Sinorhizobium garamanticum: PZN02_006222
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Entry
PZN02_006222 CDS
T09001
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
egi
Sinorhizobium garamanticum
Pathway
egi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
egi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PZN02_006222 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
egi03000
]
PZN02_006222 (nifA)
Transcription factors [BR:
egi03000
]
Prokaryotic type
Helix-turn-helix
Other families
PZN02_006222 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_5
AAA_2
GAF_2
AAA
Mg_chelatase
MCM
DUF815
TIP49
AAA_3
AAA_30
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WEX91825
LinkDB
All DBs
Position
unnamed:complement(396282..397904)
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AA seq
540 aa
AA seq
DB search
MHKQDMLSTGMYRISKSLFAPTGLEITLANFVNTLSLLLPMRHCGIVVPAADGEPEITVT
SGAGHESPGAAHYIVPRVAIDRIIATGARLVIPDVSTSELFQAELLSSSTGNVPGTFIGV
PMKVDQKTLGILWIERARNVTSNNDCEEEVRFLTMVANLAGAAIRLYRSLRRDGQPFAEE
QQAPKNSRDEERQGSTRHRPVKISWIVGESPALKAVVETITVVAETNSTVLLRGESGTGK
ESFAKAIHELSSRRKKPFVKLNCAALSEGVLESELFGHEKGAFTGAISQRAGRFELADGG
TLLLDEIGEISPAFQAKLLRVLQEGELERVGGTKTLKVDVRLICATNKDLETAVANGEFR
ADLYYRINVVPITLPPLRERDGDIPRLAKVFLDRFNKENDRELTFAPSALEFLAKCDFPG
NVRELENCVRRTATLARSTTIIASDFACQNGQCHSSLLWKRAGGWPCGNAINEFTPGNRT
AIGPPANSAGEAPHLTDRERLVSAMVEAGWVQARAARILGLTPRQVGYALRRHGIRVKKF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaacaggacatgttgtccaccggaatgtaccggatatcaaagtctttatttgct
cccactggtcttgagatcacgcttgcgaatttcgtaaataccctctccttgcttctgcca
atgcgccactgcggcatcgtcgttccggccgctgacggagagccagagataaccgtaacc
tccggcgctgggcatgaatctccgggagccgctcactacatcgtacctagggtcgcaata
gaccgaatcatcgcgaccggcgcgcggctcgtcataccggacgttagtacatcggaacta
ttccaagccgaacttctatcgtcttcaaccggcaatgttccgggtacgttcatcggtgtt
ccgatgaaggtcgatcaaaaaacgcttggaatattatggatcgagcgcgccagaaacgtt
acctccaataatgattgcgaggaggaagtacggttcctgactatggtcgccaatcttgca
ggcgcggccatccggctctatcgcagtcttagaagggatggccaaccattcgccgaagag
caacaagcaccgaagaattcccgtgacgaggagaggcagggctccacccggcatcggcct
gtcaaaatcagctggattgtcggggaaagtcccgcactcaaggcggtggtcgaaaccatc
acggtcgtggcagagaccaattcaaccgtccttctcaggggcgaaagcgggactggcaag
gaatcctttgccaaggcaatccacgaactctcatcccggcgaaagaagcccttcgtcaag
ttgaattgcgccgcactgtctgaaggcgttttggaatcggagctgtttgggcatgagaaa
ggtgctttcaccggggctatctctcagcgagcaggccgcttcgaactcgcggacggcgga
acgttgctgcttgatgaaatcggcgagatttcgccggcatttcaagcgaagctgttacgt
gtcctgcaggaaggtgaactggagcgagtcggcggcacaaagacgctgaaagtcgacgtc
cgactcatatgcgccaccaacaaggacctcgagacggctgtcgcgaacggggagttcagg
gccgacctttattaccgcatcaatgtggtccccatcactttgccgccacttagggagcgc
gacggtgacattccacgacttgcgaaagttttccttgacagattcaacaaggagaacgat
cgcgaacttaccttcgcgccctcagcactggagttcttggcgaaatgcgacttccccggc
aacgttcgcgagctagaaaactgcgtgcgaaggaccgcgacactcgcccgttcaacaacg
attatcgcatcagatttcgcctgccagaatggacagtgccattcttcactcctctggaaa
cgagctggcggttggccttgcggcaatgccatcaatgagtttactcccggtaatcgaacc
gcgattggaccgccggccaactccgcaggagaagcaccgcatctgaccgatcgtgagcgg
ctggtcagcgctatggtggaggccggctgggttcaggccagggctgctcgtattctcggc
ctgacaccgcggcaggtcggctatgccctgcgccggcatggcatccgggtgaagaagttc
taa
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