Echinococcus granulosus (hydatid tapeworm): EGR_00328
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Entry
EGR_00328 CDS
T05553
Name
(RefSeq) Pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
EGR_00328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egl03019
]
EGR_00328
Messenger RNA biogenesis [BR:
egl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
EGR_00328
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
36336043
NCBI-ProteinID:
XP_024356255
UniProt:
W6VE25
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MELAAGAIVVAGSIEANGNDASGLPEDSLKSSNSLNPSVSVVDTSIGNDSEVDIDANVDN
FFTKDESANVVIDKFGDEEDTDEDDDTVNVIIKPSKGSIYKTGTTYQARSQQAGAQGQKA
LRPGININDPGSIQGVPTIEFNISSLGEDDKPWKRPGADITDYFNYGFTEDTWLQYCEKQ
KIIRQEYANTALKPVLVGAAAGFGLTNLSSASHRGVMRFPQQQQQQNKDIHVLSGRGRSP
SVSDEELEKKNGLLGPGQAFNIPPPCFAPPTGGDALSQFGNVANALNFPPPGFTNTSVPP
PLLGSGFGSQQPGHQWPQSNIGSGLLPLFPGQSVRSTGGRNHHSDNRRDRSPENQLYHEE
SSRDYGRHGERSSRRRGSRERRRDRSRERSRERDYSLVPSVSTNSGVPGGATTGSVSEAG
ASRSTRSGESRRRSERESHRSHHRHRRTSRHRSPSCQTSRPEPTESLNSQLSTVPSQPID
PLEAASAAAADISEKIRRASAGDGVSG
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggagttggccgctggtgcaattgtcgttgccggttcaattgaggctaatggcaatgat
gcaagtggtttacccgaggattcattgaaaagctcgaactcacttaatccgtccgtgagc
gttgttgatacgtctattgggaatgattctgaagtggatatcgatgccaacgttgataat
ttttttacgaaggacgaatctgcaaacgtagtaattgacaaattcggtgacgaggaggac
actgacgaggatgatgataccgttaatgtaataatcaaaccttcgaagggtagtatttac
aaaactggtacaacctaccaggccagatctcaacaggctggggctcaaggccaaaaggcg
ttaaggccgggcataaatataaatgaccctggcagtattcaaggtgttcctacaatagaa
tttaatatttcgtcattgggtgaagatgacaagccttggaaaaggcccggtgccgatata
actgactatttcaattatgggtttactgaagacacttggttgcagtactgtgaaaaacaa
aagattattcgtcaagaatatgctaacacagctcttaagcctgtcttagttggtgccgct
gctggttttggcttgacaaatctctcttctgcaagtcaccgtggagttatgcggttcccc
caacagcagcaacagcagaacaaggacatccatgttcttagcggacgcggtcgctcccct
tcagttagcgatgaggaattggaaaagaagaatggtcttttgggaccgggccaggctttc
aacattcctcctccgtgctttgccccgcctactggtggcgatgccctcagtcaattcggg
aatgttgccaatgccttgaatttcccaccacctggatttaccaacacttccgtccctcct
cctcttcttggatcaggatttggttcacagcagccaggtcatcagtggccacagtcaaat
attggaagtggattgcttcctctttttcctggacagtctgttcgctcgactggtggaaga
aatcaccattcggataatcggagagataggtctcccgaaaaccaattatatcatgaggag
tcctcacgcgactacggtcgtcacggtgaacgctcgtctcggagacgcggatcgcgtgag
cgtcgtcgggaccggtcacgagagcggtcgcgtgagcgggattactcgctggtaccgtcg
gtcagcacaaacagtggcgtacctggtggcgccactacaggatcggtgtccgaagctggc
gcctcgcgctccactcgaagcggggaatcgagacgacgcagtgagagggagtcacatcgt
agtcaccaccgccaccgacgcacctcccgtcatcgctctccctcctgtcagacctctcga
cccgagcccaccgagtccctaaattcacagctatctacagtcccttcccagcctatcgat
cctctcgaagccgcctctgctgctgccgctgatatcagcgaaaagattcgtcgggctagt
gccggggatggtgtatctggttga
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