Echinococcus granulosus (hydatid tapeworm): EGR_01292
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Entry
EGR_01292 CDS
T05553
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EGR_01292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egl03400
]
EGR_01292
DNA repair and recombination proteins [BR:
egl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
EGR_01292
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
AAA_29
Motif
Other DBs
NCBI-GeneID:
36337007
NCBI-ProteinID:
XP_024354865
UniProt:
W6VA83
LinkDB
All DBs
Position
Unknown
AA seq
1191 aa
AA seq
DB search
MRLLESNLLVDEDFSPKVSCSKRRRLVFYSSDDENENSPRDVSDIPQEKSLTNLYSCPSK
RFARDVTNSPKLSSSSARSKCSSVVSMKKRFLETSSNDLFNTSAVDSCFTMDPVDGSRSF
AWPHLTYPFLLPDRIQDACGHRPAHPDYDPRTLLVPEDFLRKQSPALRQWWILKSQNFDT
LLFFKMGKFYELYHMDAVIAVEELKLTYMKGEFAHSGFPEIAFQRMADHLLHRGYKVARV
EQTETPEAMTKRTSGRSGVDRVVRREICQVITPGTWFAPLRNGISSDNALDVSCATSSSQ
PISHSEMETDLMFNRYLLVILEGSGNEKSETQLGIALLKAATGEIMLSYPRFFLRGISAF
GLILHLTSAFLIGQFSDDIHYSRMCTIVAHFPPSQILFERGNLSNKLRRMLKARLPSVPF
EGLAGGKQFLSAHETICALESADYFTLAPSQRASSAGTAPSHLSKVDCWPADLLRMLDPV
DTLERNVLPGYELAVRCLGAVVFYLRYCLTDTEILSLGLIHEYRPADVSSALVLGQPFYE
RQVNMVLDSVTMENLEILTNNFNGTLEGTLLERLDSCCTPFGRRLLRTWVVSPPCHPNSI
TKRQDAIQELMDLSPQLQSVRDALRRLPDLERLLTKIHIMGWNATRPDHPESRAIVVDET
IYSKRKIMDFLLALCGFKSAILIIKDFSRFGVKSELLRFLASLREEGGAFPNYSEELSLF
DKAFDHEKAKRDGCIVVEPGFDPEFDKACEGLERAEMDMEDFLAEQSDLIGCQLTYTGTG
KNRFQIEVPETCMDRVPHAWEATGQRKGFRRFRPPPIKELFARLVIAEDAKQESMQGIMR
RLFASFSSSYSNWQAAIRCIAELDCLISLANYSISAAAITCRPEFYPLDPGTKPFLEIEG
GYHPCLVRSFSGGEITPNDVQLGPILGQEKATSTGFKVGVTTLLITGPNMGGKSTLMRQT
ALLVILAHLIPATSCRLTPVDRVFTRIGASDRLISGQSTFFVELAETAVILNHATAHSLV
LMDELGRGTSTRDGSALASAVLRYLTTARPSGPLSLFSTHYHNLVEVLQKSRTGASLEAL
DIGHMACLVGDGGLEEQPAEAEAGSDTQKITFLYKLVPSACPKSYGFNVARLAQIPDEVI
NKGVIMAREFEKATLVFSCLRDILSRKMDHDQAQLWRLRLANLSREKMRGT
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgaggttactggagtcgaaccttcttgtcgatgaagatttctcacctaaggtgagctgt
tccaagagaaggcgtctcgtgttttattcaagtgatgatgaaaatgagaattcccctcgt
gatgtatccgatattcctcaggagaaatcgcttacgaatttgtattcatgtccaagtaaa
agatttgccagagacgtaacaaattcaccgaaactctcctcttcgtcggcgagatcaaaa
tgctcttcggtggtctccatgaaaaagcgttttttagaaacatcatcaaacgacttgttc
aacacttctgctgtggactcatgcttcacaatggatccagttgatggaagtaggagtttt
gcctggccgcacctcacttatccatttttgctacctgaccgaattcaagacgcgtgtgga
catcgtcctgcccatcctgattacgatccgagaactctactcgtcccagaggacttcctt
cggaagcagtcacctgctctgcggcagtggtggattctcaagtctcagaattttgatact
ttgttgttcttcaaaatggggaaattctatgaactctatcacatggatgctgtcattgct
gtagaagaactcaagttgacttatatgaaaggagaatttgcacactccggatttccagag
attgcctttcagcgaatggcagatcatctcctccatcgtggttacaaagtggcccgagtg
gaacaaactgagacaccggaagccatgaccaagcggacaagtggtcgctcaggcgtagac
agggttgtccgtcgggaaatctgccaggttatcactcctggtacctggtttgcgcctctg
cgtaatgggatttcttcagataacgctcttgatgtatcttgtgcaacatcctcttcccag
cctattagtcactcagaaatggagaccgatctcatgttcaatcgttatcttctagtgatt
ctcgaggggtcaggtaacgaaaaatcagagactcagctcggcatcgcccttctaaaagca
gctactggagaaattatgttaagttacccccgcttttttctgcgaggcatttcagcattt
ggtctaattctgcatttaaccagtgcgttcttgattggtcagttctcagacgatatccac
tactctcgaatgtgcacaatagtcgcccactttcccccatcccagatcctcttcgaacgc
ggcaatctgagcaataagctgcgaaggatgctgaaggcgcgtttgccgagtgtgccattc
gaagggctggcgggaggaaagcagttcctctcggcccatgagactatctgtgcgttggaa
tcggctgactacttcaccctcgccccgagtcagcgcgcgtcctccgcgggcaccgctccc
tcgcacctctccaaggtcgactgctggcctgccgacctcctccgaatgcttgatcccgtc
gatacgctggagaggaatgttctaccagggtacgaattggcagttcggtgcctcggggca
gtagtgttttacctgcgctactgcctcaccgacacggagatcctctctctgggtcttatc
cacgagtatcgccctgcagatgtctcctcagcgctcgttcttggccaacccttctatgag
cgtcaggtcaacatggttcttgatagcgtaactatggagaatctcgaaatcctaacaaac
aacttcaatggaacactagagggcactctccttgagaggctggactcatgttgtacaccg
ttcggtcgacgtctgttgagaacgtgggtagtgagcccaccctgtcaccctaactctata
actaagcgtcaagacgccattcaggaactgatggacttgtccccccagctgcagagtgtt
cgtgatgctcttcgacgtctgccagatcttgagcgacttcttacaaaaatccacataatg
ggatggaacgccactagacctgatcatccggagtcccgagctattgtggtcgatgagact
atctattcgaaaaggaaaattatggattttctcctcgccctatgtgggttcaagtcggcc
attctcatcattaaggacttctcgcgattcggcgtcaaatctgagctcttgcgtttcctt
gcctccctgcgtgaagagggtggagcttttcccaattatagtgaggaactttcattattt
gacaaagcatttgatcatgaaaaggccaaacgcgatggctgcattgttgtggagccgggt
ttcgaccccgagttcgataaagcctgcgaaggccttgagagagcagaaatggatatggaa
gatttcttagctgaacagagtgacctgattggctgtcagctgacctacacggggacgggg
aagaaccgttttcagatagaggtgccagagacgtgcatggatcgagtgcctcatgcctgg
gaggcaacgggccagcgaaagggctttcgtcgctttcgtccaccccccatcaaggagctc
ttcgcacgcctcgttattgccgaagacgccaagcaggagagcatgcagggcatcatgcgt
cgtctctttgcctcctttagctccagctactccaactggcaggcggccatcaggtgcatt
gcagaactggattgcctcatctctctcgccaactacagcatctccgctgccgcaatcacc
tgtcgtccggaattctaccctcttgatcctggaactaagccatttctggagattgaaggc
ggttaccatccgtgtctagtgagaagcttttccggtggcgagatcactcccaatgacgtt
cagttgggtcccattctgggccaggagaaggccacctcgacgggcttcaaggtgggcgtc
acgactcttctcatcactggacccaatatgggcggcaaatctactctcatgcgtcagacc
gcacttctggtcattctcgcccacctgataccggctacgagttgtcgtctgacgccagtc
gacagggtgttcacgcgaatcggagcatcggatcggttgatatcgggtcaaagcacgttc
tttgtggagctggcagagacggccgtgatcctcaatcacgcgacggcgcacagccttgta
ctgatggatgagttgggccgcggtacctcgacccgagacggttccgccctggcctctgcc
gtcctccgctatctcaccacagcacgcccttctggtccgctaagcctcttctctactcac
taccacaacctcgtcgaggtgctgcagaaatcccggaccggtgcctccctcgaggctctc
gacatcgggcacatggcatgtttagtcggcgatggagggttggaggagcagccggcagaa
gcggaggcgggtagcgacacgcagaagatcaccttcctctacaagctcgttccctcggca
tgtcccaaaagctacggttttaatgtcgctcgcttggcacaaattccagacgaagtaatt
aataagggcgtaatcatggccagagagtttgagaaggcgacgttggttttctcgtgtctg
cgggatattttgtcgagaaaaatggatcatgatcaggctcaactttggcgcttacgattg
gcaaatttgagtcgcgaaaagatgcgcggaacctag
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