Echinococcus granulosus (hydatid tapeworm): EGR_01552
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Entry
EGR_01552 CDS
T05553
Name
(RefSeq) Cleavage and polyadenylation specificity factor subunit 6
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03015
mRNA surveillance pathway
egl03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
EGR_01552
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
EGR_01552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egl03019
]
EGR_01552
Messenger RNA biogenesis [BR:
egl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
EGR_01552
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
36337267
NCBI-ProteinID:
XP_024354666
UniProt:
W6UPA2
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MDNGAEIDLYDNIEEDFVQESNELAELYDDVIIPPSSKPEHTSSDSKLIQVKPVAAPAQP
PHTGKRFATYLGNLTWWSTDVDIQEAFSSIGIRDILEIKFHENRQNGQSKGFCVIVFGSE
SSVKIGMEKISKIEINGQQPVLTYCTKQSLAVFEKAASNDGIIQNSSASALLGAASNSRI
PSGSSNGRLPPPLMSTPALPASLGFSIRGSSSLMGRASSSRSAGGALSLDLLMSGFSLPT
TLSANPGSSLIPTPPLAIPGTSGANAHINPNFLQQGGLNQAGAVGANSLLQTQLGASVLR
PQLDQFGRSVVQPYTPGDIASDCTFFTSILGQTSKISEAEFEDIMEKNKTVSSTAINRAV
PDAACGNYSRAIETLVTAISLIKQSKIANDDRCKILIDSLQDTLHGIEMKSYGSKGGGSS
SGGSRRRRRSYSNSGSEGDDYRGGSRHHRSSRHRSRSRSPRGSRNDDKRHRSSRNEHDRL
GGRDYYGSGSPSYHKLVLFLPKSSPHSWHSLMTSASQYTVLRLWHVLDSGKSPCALAFLC
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggataacggtgctgaaatagacttgtacgataatattgaggaagatttcgtccaggaa
tctaatgagcttgccgaactctacgatgatgtcataataccaccgtcttcgaaacccgag
cacactagttccgactcaaagctcatccaggttaaacctgttgctgcaccagcgcagcct
cctcatacaggaaagcggttcgctacatatctaggaaatcttacatggtggtctactgat
gtcgatatacaggaagccttcagcagcattggtatacgagacattctggaaatcaaattt
catgaaaatcgccaaaatgggcagtcgaagggattttgtgtgattgtttttggatcagaa
tcgtctgtcaagattgggatggaaaagatctcaaaaattgaaattaatggtcaacagcca
gttcttacatactgtacaaaacaaagcttggcagttttcgagaaagctgccagcaacgat
ggaatcattcaaaactcgtccgcctctgccttgcttggtgcggcatcgaatagtcgcatt
cccagtggttcaagtaatggacgtttacccccaccactaatgagcactcctgcacttcca
gcgtctcttggatttagtattcggggcagctcgtcactcatgggtcgagcatcctcatct
cgttctgctggtggggcgctctcgcttgatttgctcatgtctggtttcagcctacctaca
actctctctgctaaccctggatcaagcctcatccctacacctccattagctatacctggc
acatctggtgccaacgcacatatcaaccccaacttcctgcagcagggcggattaaatcaa
gccggagcagtcggggcaaattctttgcttcaaacccaattgggtgcttctgtgctccgt
ccccagctggatcagttcggacgctctgtggtgcaaccatacacgccaggtgatatagct
tctgattgtacatttttcacttctattttaggtcagacatcaaagataagtgaggcggaa
tttgaagatataatggaaaaaaataagacagtgtcttctaccgctatcaatcgggctgtt
ccggacgcagcttgcgggaactattcgagggcaatcgaaacgctggttaccgcaatatct
ctgattaagcagtcgaaaattgcaaatgatgatcggtgcaaaatccttatcgattccttg
caggacacacttcatggaatagaaatgaagtcttatggctcaaagggtggaggtagcagc
agtggtgggagtagacgtcgccggcgttcctatagtaatagcggtagtgagggcgatgac
tacagaggtggcagtcggcatcatcgcagtagtcgtcatcgctctcgctctcgttcacct
cgtggctcacgaaatgacgacaagcgccaccgatcctctcgaaatgaacacgatagactt
ggcggtcgcgattattatggcagtggttcgccctcgtatcataaacttgtactatttctc
cctaaatcgtctcctcattcatggcacagcctaatgaccagcgcctcacaatacaccgtc
ctaagattgtggcacgtgttggacagtggcaaatccccgtgtgcccttgcatttttgtgt
taa
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